TreatCFM001357's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| chlorophyll catabolic process | 0.008121675 | GO:0015996 |
| leucine catabolic process | 0.008121675 | GO:0006552 |
| calcium ion transmembrane transport | 0.008855428 | GO:0070588 |
| chloroplast inner membrane | 0.040433811 | GO:0009706 |
| calcium-transporting ATPase activity | 0.045016586 | GO:0005388 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T000197 | AT5G43430 (5.00E-80) | ETFBETA|electron transfer flavoprotein beta |
| CRO_T010594 | AT2G22950 (0) | ACA7|auto-regulated Ca2+-ATPase 7 |
| CRO_T010911 | AT3G52220 (1.00E-60) | |
| CRO_T025648 | AT4G00467 (4.00E-16) | Calcium-dependent lipid-binding (CaLB domain) family protein |
| CRO_T028602 | AT2G17550 (3.00E-115) | TRM26|TON1 Recruiting Motif 26 |
| CRO_T028922 | AT3G45940 (2.00E-19) | Glycosyl hydrolases family 31 protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000240 | leucine catabolic process chlorophyll catabolic process | details |
| TreatCFM000261 | seleno-amino acid detoxification and volatilization III S-methyl-L-methionine cycle L-methionine biosynthesis II Cysteine and methionine metabolism S-adenosylmethionine-homocysteine S-methyltransferase activity DNA catabolic process methionine biosynthetic process formation of glycosidic bonds, GlycosylTransferases: GTnc | details |
| TreatCFM000262 | dolichol metabolic process UDP-N-acetylglucosamine metabolic process protein N-glycosylation (eukaryotic, high mannose) phospho-N-acetylmuramoyl-pentapeptide-transferase activity UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase activity protein N-linked glycosylation N-Glycan biosynthesis transaminase activity | details |
| TreatCFM000615 | hydrolase activity, hydrolyzing N-glycosyl compounds trans-zeatin biosynthesis damaged DNA binding nucleus response to UV-B cytokinin biosynthetic process Cul4-RING E3 ubiquitin ligase complex Ubiquitin mediated proteolysis DNA repair Ubiquitin_Proteasome_system, E3 adaptor: DWD | details |
| TreatCFM000890 | UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase activity phospho-N-acetylmuramoyl-pentapeptide-transferase activity UDP-N-acetylglucosamine metabolic process dolichol metabolic process primary shoot apical meristem specification acyl-CoA hydrolysis fructose 2,6-bisphosphate biosynthesis protein N-linked glycosylation regulation of transcription, DNA-templated phosphatase activity protein N-glycosylation (eukaryotic, high mannose) cutin biosynthesis sporopollenin precursors biosynthesis suberin monomers biosynthesis N-Glycan biosynthesis organic cyclic compound binding heterocyclic compound binding protein binding Ubiquitin_Proteasome_system, E3 adaptor: DWD RNA transport | details |
| TreatCFM001263 | ER membrane protein complex DNA-directed RNA polymerase I complex protein folding in endoplasmic reticulum transcription from RNA polymerase I promoter RNA polymerase I activity single-organism metabolic process Ubiquitin_Proteasome_system, E3 adaptor: F-box | details |
Expression profiles
 Show details about module gene expression profiling |