TreatCFM001769's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| glycosaminoglycan biosynthetic process | 0.008669399 | GO:0006024 |
| heme a biosynthetic process | 0.008669399 | GO:0006784 |
| heparan sulfate proteoglycan biosynthetic process | 0.008669399 | GO:0015012 |
| respiratory chain complex IV assembly | 0.008669399 | GO:0008535 |
| formation of glycosidic bonds, GlycosylTransferases: GTnc | 0.008771928 | cazy family |
| Protein_kinases_phosphatases, PPC:4.4.1: Unknown Function Kinase | 0.009495062 | kinase family |
| oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor | 0.009653685 | GO:0016653 |
| oxidoreductase activity, acting on the CH-CH group of donors | 0.01929368 | GO:0016627 |
| ADP binding | 0.025700593 | GO:0043531 |
| cytochrome-c oxidase activity | 0.030085867 | GO:0004129 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T009611 | AT3G14860 (3.00E-145) | NHL domain-containing protein |
| CRO_T011513 | AT5G56090 (0) | COX15|cytochrome c oxidase 15 |
| CRO_T015995 | AT4G24230 (4.00E-14) | ACBP3|acyl-CoA-binding domain 3 |
| CRO_T016223 | AT1G58400 (3.00E-73) | Disease resistance protein (CC-NBS-LRR class) family |
| CRO_T016665 | AT4G25660 (3.00E-12) | PPPDE putative thiol peptidase family protein |
| CRO_T017766 | AT1G80290 (4.00E-98) | Nucleotide-diphospho-sugar transferases superfamily protein |
| CRO_T018805 | AT5G27520 (3.00E-131) | PNC2|peroxisomal adenine nucleotide carrier 2 |
| CRO_T022523 | AT1G51910 (4.00E-26) | Leucine-rich repeat protein kinase family protein |
| CRO_T029076 | AT5G62520 (5.00E-20) | SRO5|similar to RCD one 5 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000240 | leucine catabolic process chlorophyll catabolic process | details |
| TreatCFM000261 | seleno-amino acid detoxification and volatilization III S-methyl-L-methionine cycle L-methionine biosynthesis II Cysteine and methionine metabolism S-adenosylmethionine-homocysteine S-methyltransferase activity DNA catabolic process methionine biosynthetic process formation of glycosidic bonds, GlycosylTransferases: GTnc | details |
| TreatCFM000262 | dolichol metabolic process UDP-N-acetylglucosamine metabolic process protein N-glycosylation (eukaryotic, high mannose) phospho-N-acetylmuramoyl-pentapeptide-transferase activity UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase activity protein N-linked glycosylation N-Glycan biosynthesis transaminase activity | details |
| TreatCFM001116 | Protein_kinases_phosphatases, PPC:4.5.4: GSK3/Shaggy Like Protein Kinase Family uridylyltransferase activity ErbB signaling pathway stachyose degradation sucrose biosynthesis II UDP-glucose biosynthesis Pentose and glucuronate interconversions | details |
| TreatCFM001168 | Antigen processing and presentation glycosaminoglycan biosynthetic process heparan sulfate proteoglycan biosynthetic process formation of glycosidic bonds, GlycosylTransferases: GTnc Protein_kinases_phosphatases, PPC:4.4.1: Unknown Function Kinase Transcription_related, Transcription factor: C2C2-Dof cellular protein metabolic process single-organism process cellular transition metal ion homeostasis metal ion transport adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc | details |
| TreatCFM001768 | beta-sitosterol UDP-glucosyltransferase activity oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor respiratory chain complex IV assembly heme a biosynthetic process lipid glycosylation oxidoreductase activity, acting on the CH-CH group of donors seed development cytochrome-c oxidase activity chlorogenic acid biosynthesis I chlorogenic acid biosynthesis II benzoate biosynthesis I (CoA-dependent, β-oxidative) Phenylpropanoid biosynthesis sterol metabolic process transferase activity, transferring acyl groups other than amino-acyl groups | details |
| TreatCFM001996 | UDP-L-arabinose biosynthesis I (from UDP-xylose) UDP-sugars interconversion Phagosome aerobic respiration I (cytochrome c) galactose metabolic process microtubule-based process ubiquinol-cytochrome-c reductase activity UDP-glucose 4-epimerase activity structural constituent of cytoskeleton 2 iron, 2 sulfur cluster binding hydrogen ion transmembrane transport Amino sugar and nucleotide sugar metabolism | details |
| TreatCFM002047 | kinesin complex microtubule-based movement microtubule binding microtubule motor activity ATPase activity UDP-D-galacturonate biosynthesis II (from D-galacturonate) oxidoreductase activity phosphotransferase activity, alcohol group as acceptor Amino sugar and nucleotide sugar metabolism phosphatidylcholine acyl editing phospholipases triacylglycerol degradation | details |
Expression profiles
 Show details about module gene expression profiling |