TreatCFM000256's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| ent-kaurene biosynthesis I | 0.007143908 | plantCyc |
| proanthocyanidins biosynthesis from flavanols | 0.007143908 | plantCyc |
| leucopelargonidin and leucocyanidin biosynthesis | 0.008920655 | plantCyc |
| Antigen processing and presentation | 0.01408171 | KEGG pathway |
| Diterpenoid biosynthesis | 0.01408171 | KEGG pathway |
| hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc | 0.016870246 | cazy family |
| Protein_kinases_phosphatases, PPC:4.5.2: CDC2 Like Kinase Family | 0.016870246 | kinase family |
| Transcription_related, Transcription factor: MIKC | 0.016870246 | TF family |
| Transcription_related, Transcription factor: NF-YB | 0.016870246 | TF family |
| regulation of vesicle fusion | 0.028224945 | GO:0031338 |
| activation of GTPase activity | 0.028224945 | GO:0090630 |
| clathrin coat assembly | 0.028224945 | GO:0048268 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T001918 | AT1G04830 (1.00E-103) | Ypt/Rab-GAP domain of gyp1p superfamily protein |
| CRO_T006223 | AT5G42800 (9.00E-38) | DFR|dihydroflavonol 4-reductase |
| CRO_T010102 | AT1G31740 (0) | BGAL15|beta-galactosidase 15 |
| CRO_T012768 | AT4G02780 (3.00E-164) | ATCPS1|ENT-COPALYL DIPHOSPHATE SYNTHETASE 1; CPS|CPP synthase; GA1|GA REQUIRING 1 |
| CRO_T014925 | AT2G03630 (2.00E-10) | unknown protein |
| CRO_T018224 | AT3G53340 (2.00E-63) | NF-YB10|nuclear factor Y, subunit B10 |
| CRO_T023289 | AT1G53050 (3.00E-176) | Protein kinase superfamily protein |
| CRO_T026300 | AT2G42830 (7.00E-28) | AGL5|AGAMOUS-like 5; SHP2|SHATTERPROOF 2 |
| CRO_T028791 | AT3G22490 (1.00E-61) | Seed maturation protein |
| CRO_T030052 | AT1G03050 (0) | ENTH/ANTH/VHS superfamily protein |
| CRO_T032694 | AT2G40280 (5.00E-169) | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000061 | ATPase activity, coupled to transmembrane movement of substances organic substance transport single-organism transport lipid transport hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc Protein_kinases_phosphatases, PPC:1.13.3: Leucine Rich Repeat Kinase III beta-galactosidase activity Transcription_related, Transcription factor: B3 | details |
| TreatCFM000106 | methylation riboflavin synthase complex flavin biosynthesis I (bacteria and plants) 6,7-dimethyl-8-ribityllumazine synthase activity riboflavin biosynthetic process cellulose catabolic process Riboflavin metabolism adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc cellulase activity Starch and sucrose metabolism S-adenosylmethionine-dependent methyltransferase activity methyltransferase activity | details |
| TreatCFM000249 | Antigen processing and presentation ATPase activity, coupled to transmembrane movement of substances hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc Transcription_related, Transcription factor: NF-YB organic substance transport photosynthetic acclimation regulation of vesicle fusion single-organism transport activation of GTPase activity lipid transport Transcription_related, Transcription factor: NAC regulation of transcription, DNA-templated | details |
Expression profiles
 Show details about module gene expression profiling |