TreatCFM000061's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| ATPase activity, coupled to transmembrane movement of substances | 0.004041343 | GO:0042626 |
| organic substance transport | 0.014837787 | GO:0071702 |
| single-organism transport | 0.016680183 | GO:0044765 |
| lipid transport | 0.019748674 | GO:0006869 |
| hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc | 0.027012332 | cazy family |
| Protein_kinases_phosphatases, PPC:1.13.3: Leucine Rich Repeat Kinase III | 0.027012332 | kinase family |
| beta-galactosidase activity | 0.037006895 | GO:0004565 |
| Transcription_related, Transcription factor: B3 | 0.045711299 | TF family |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T001059 | - | - |
| CRO_T001671 | - | - |
| CRO_T002050 | AT2G13610 (9.00E-18) | ABCG5|ATP-binding cassette G5 |
| CRO_T002582 | - | - |
| CRO_T009948 | - | - |
| CRO_T010102 | AT1G31740 (0) | BGAL15|beta-galactosidase 15 |
| CRO_T010586 | AT5G52120 (4.00E-20) | AtPP2-A14|phloem protein 2-A14 |
| CRO_T022785 | - | - |
| CRO_T023554 | AT1G72460 (5.00E-14) | Leucine-rich repeat protein kinase family protein |
| CRO_T027935 | AT3G09250 (3.00E-48) | Nuclear transport factor 2 (NTF2) family protein |
| CRO_T031766 | AT3G47760 (5.00E-20) | ABCA5|ATP-binding cassette A5; ATATH4|A. THALIANA ABC2 HOMOLOG 4; ATH4|ABC2 homolog 4 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000243 | DNA binding Transcription_related, Transcription regulator: HMG Transcription_related, Transcription factor: B3 | details |
| TreatCFM000249 | Antigen processing and presentation ATPase activity, coupled to transmembrane movement of substances hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc Transcription_related, Transcription factor: NF-YB organic substance transport photosynthetic acclimation regulation of vesicle fusion single-organism transport activation of GTPase activity lipid transport Transcription_related, Transcription factor: NAC regulation of transcription, DNA-templated | details |
| TreatCFM000256 | ent-kaurene biosynthesis I proanthocyanidins biosynthesis from flavanols leucopelargonidin and leucocyanidin biosynthesis Antigen processing and presentation Diterpenoid biosynthesis hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc Protein_kinases_phosphatases, PPC:4.5.2: CDC2 Like Kinase Family Transcription_related, Transcription factor: MIKC Transcription_related, Transcription factor: NF-YB regulation of vesicle fusion activation of GTPase activity clathrin coat assembly | details |
| TreatCFM000327 | nucleoside metabolic process quercetin 7-O-glucosyltransferase activity quercetin 3-O-glucosyltransferase activity dTDP biosynthetic process flavonoid biosynthetic process dTTP biosynthetic process dUDP biosynthetic process flavonoid glucuronidation thymidylate kinase activity catalytic activity uridylate kinase activity apigeninidin 5-O-glucoside biosynthesis luteolinidin 5-O-glucoside biosynthesis Pyrimidine metabolism intracellular membrane-bounded organelle integral component of membrane pyrimidine deoxyribonucleotide phosphorylation pyrimidine deoxyribonucleotides de novo biosynthesis II superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) formation of glycosidic bonds, GlycosylTransferases: GTnc pyrimidine deoxyribonucleotides de novo biosynthesis I cytokinin-O-glucosides biosynthesis chloroplast outer membrane chloroplast organization | details |
| TreatCFM000698 | oxo-acid-lyase activity 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity omega peptidase activity imidazoleglycerol-phosphate synthase activity Ubiquitin_Proteasome_system, DUB: Josephin L-glutamine degradation I L-histidine biosynthesis thiol-dependent ubiquitin-specific protease activity transferase activity, transferring hexosyl groups histidine biosynthetic process protein deubiquitination Biosynthesis of amino acids | details |
| TreatCFM001170 | pollen tube tip actin cytoskeleton organization pollen tube growth transferase activity, transferring hexosyl groups Transcription_related, Transcription regulator: HMG Transcription_related, Transcription factor: B3 | details |
Expression profiles
 Show details about module gene expression profiling |