TreatCFM000263's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| DNA binding | 0.003476719 | GO:0003677 |
| cytokinin-O-glucosides biosynthesis | 0.004955011 | plantCyc |
| nucleus | 0.005443405 | GO:0005634 |
| Transcription_related, Transcription factor: SBP | 0.009298062 | TF family |
| transcription factor activity, sequence-specific DNA binding | 0.013191015 | GO:0003700 |
| transcription, DNA-templated | 0.025056061 | GO:0006351 |
| regulation of transcription, DNA-templated | 0.026298189 | GO:0006355 |
| flower development | 0.026298189 | GO:0009908 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T004366 | AT1G20980 (9.00E-27) | ATSPL14|SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 14 |
| CRO_T009515 | AT2G24020 (5.00E-26) | Uncharacterised BCR, YbaB family COG0718 |
| CRO_T014962 | AT2G28080 (7.00E-160) | UDP-Glycosyltransferase superfamily protein |
| CRO_T020270 | AT1G28220 (5.00E-101) | ATPUP3|purine permease 3 |
| CRO_T021230 | AT5G47240 (2.00E-63) | atnudt8|nudix hydrolase homolog 8 |
| CRO_T027272 | - | - |
| CRO_T033484 | AT1G19510 (9.00E-22) | ATRL5|RAD-like 5; RSM4|RADIALIS-LIKE SANT/MYB 4 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000312 | ABC transporters Ribosome biogenesis in eukaryotes microtubule-based movement ATPase activity microtubule motor activity microtubule binding ATPase activity, coupled to transmembrane movement of substances | details |
| TreatCFM000527 | chromosome organization Cell cycle Ribosome biogenesis in eukaryotes cell redox homeostasis | details |
| TreatCFM000808 | Transcription_related, Transcription factor: SBP UDP-α-D-glucuronate biosynthesis (from myo-inositol) transcription factor activity, sequence-specific DNA binding transcription, DNA-templated Ascorbate and aldarate metabolism Fatty acid metabolism regulation of transcription, DNA-templated flower development cytokinin-O-glucosides biosynthesis very long chain fatty acid biosynthesis I very long chain fatty acid biosynthesis II DNA binding flavonoid biosynthetic process flavonoid glucuronidation quercetin 7-O-glucosyltransferase activity quercetin 3-O-glucosyltransferase activity | details |
| TreatCFM000873 | phosphatidylcholine metabolic process calcium ion binding phospholipase D activity N-acylphosphatidylethanolamine-specific phospholipase D activity lipid catabolic process choline biosynthesis III phosphatidate metabolism, as a signaling molecule phospholipases Glycerophospholipid metabolism Plant-pathogen interaction | details |
| TreatCFM000915 | Protein_kinases_phosphatases, PPC:4.5.4: GSK3/Shaggy Like Protein Kinase Family Ribosome biogenesis in eukaryotes cell part transmembrane transporter activity | details |
| TreatCFM001742 | phosphatidylcholine metabolic process endosomal transport tetracyclic triterpenoid biosynthetic process endosome N-acylphosphatidylethanolamine-specific phospholipase D activity cycloartenol synthase activity phospholipase D activity phosphatidylcholine biosynthesis II phosphatidylcholine biosynthesis III phosphatidylcholine biosynthesis IV plant sterol biosynthesis II choline biosynthesis I choline biosynthesis III mangrove triterpenoid biosynthesis BLOC-1 complex lipid catabolic process phosphatidate metabolism, as a signaling molecule plant sterol biosynthesis root development phospholipases Glycerophospholipid metabolism Steroid biosynthesis Endocytosis S-adenosylmethionine-dependent methyltransferase activity | details |
| TreatCFM002091 | endosomal transport BLOC-1 complex NF-kappa B signaling pathway root development peptidyl-tyrosine phosphorylation formation of glycosidic bonds, GlycosylTransferases: GTnc Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII Transcription_related, Transcription factor: C2H2 | details |
Expression profiles
 Show details about module gene expression profiling |