TreatCFM000303's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| glyoxysome | 0.000709167 | GO:0009514 |
| beta-Alanine metabolism | 0.001063908 | KEGG pathway |
| pantoate-beta-alanine ligase activity | 0.002024381 | GO:0004592 |
| malate synthase activity | 0.002024381 | GO:0004474 |
| phosphopantothenate biosynthesis I | 0.002659181 | plantCyc |
| Protein_kinases_phosphatases, PPC:2.1.4: GmPK6/AtMRK1 Family | 0.003895237 | kinase family |
| pantothenate biosynthetic process | 0.004431642 | GO:0015940 |
| glyoxylate cycle | 0.004431642 | plantCyc |
| tricarboxylic acid cycle | 0.015236373 | GO:0006099 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T008993 | AT1G64810 (1.00E-75) | APO1|ACCUMULATION OF PHOTOSYSTEM ONE 1 |
| CRO_T014289 | - | - |
| CRO_T018906 | AT4G38470 (1.00E-172) | STY46|serine/threonine/tyrosine kinase 46 |
| CRO_T019619 | AT5G48840 (1.00E-118) | ATPTS|PANTOTHENATE SYNTHETASE; PANC|homolog of bacterial PANC |
| CRO_T028873 | AT5G03860 (0) | MLS|malate synthase |
| CRO_T030174 | AT1G10020 (5.00E-159) | Protein of unknown function (DUF1005) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000227 | ErbB signaling pathway Protein_kinases_phosphatases, PPC:4.2.6: IRE/NPH/PI dependent/S6 Kinase metabolic process Fatty acid metabolism | details |
| TreatCFM000228 | PRPP biosynthesis I nucleoside metabolic process nucleotide biosynthetic process ribose phosphate diphosphokinase activity Ubiquitin_Proteasome_system, E3 adaptor: F-box plasma membrane | details |
| TreatCFM000618 | dUDP biosynthetic process dTDP biosynthetic process dTTP biosynthetic process thymidylate kinase activity ethanolamine-phosphate cytidylyltransferase activity | details |
| TreatCFM000649 | malate synthase activity glyoxysome Protein_kinases_phosphatases, PPC:1.6.4: RKF3 Like Kinase 3-hydroxyacyl-CoA dehydrogenase activity Protein_kinases_phosphatases, PPC:3.1.1: Casein Kinase I Family glyoxylate cycle unsaturated, even numbered fatty acid β-oxidation fatty acid β-oxidation II (peroxisome) fatty acid metabolic process Wnt signaling pathway protein serine/threonine kinase activity regulation of cell shape Endocytosis tricarboxylic acid cycle very long chain fatty acid biosynthesis II Fatty acid metabolism | details |
| TreatCFM000917 | beta-Alanine metabolism pantothenate biosynthetic process inositol trisphosphate metabolic process inositol-1,3,4-trisphosphate 6-kinase activity inositol-1,3,4-trisphosphate 5-kinase activity inositol tetrakisphosphate 1-kinase activity pantoate-beta-alanine ligase activity Inositol phosphate metabolism anthocyanin biosynthesis anthocyanin biosynthesis (pelargonidin 3-O-glucoside) lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) phosphopantothenate biosynthesis I proanthocyanidins biosynthesis from flavanols ethylene biosynthesis I (plants) leucodelphinidin biosynthesis pinobanksin biosynthesis 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) Flavonoid biosynthesis flavonoid biosynthesis (in equisetum) | details |
| TreatCFM001002 | sulfite oxidation IV ceramide degradation Protein_kinases_phosphatases, PPC:1.2.1: Receptor Like Cytoplasmic Kinase VIII formation of glycosidic bonds, GlycosylTransferases: GTnc starch metabolic process sphingolipid catabolic process carboxylic acid metabolic process seed maturation sucrose metabolic process Sphingolipid metabolism Sulfur metabolism sucrose synthase activity carboxy-lyase activity triacylglycerol degradation single-organism metabolic process Plant-pathogen interaction lipid metabolic process Starch and sucrose metabolism | details |
| TreatCFM001713 | RNA binding metal ion binding nucleotidyltransferase activity RNA processing vesicle-mediated transport cell part formation of glycosidic bonds, GlycosylTransferases: GTnc | details |
| TreatCFM001910 | linoleate biosynthesis I (plants) protein kinase regulator activity oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water Ubiquitin_Proteasome_system, E3 adaptor: BTB Fatty acid metabolism regulation of protein kinase activity response to red light Cul3-RING ubiquitin ligase complex membrane part | details |
Expression profiles
 Show details about module gene expression profiling |