TreatCFM000561's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| lipoate biosynthesis and incorporation I | 0.001181597 | plantCyc |
| Lipoic acid metabolism | 0.004430398 | KEGG pathway |
| lipoate biosynthetic process | 0.013023637 | GO:0009107 |
| protein lipoylation | 0.013023637 | GO:0009249 |
| cytoplasmic microtubule organization | 0.014095814 | GO:0031122 |
| response to endoplasmic reticulum stress | 0.014095814 | GO:0034976 |
| endoplasmic reticulum lumen | 0.016233994 | GO:0005788 |
| Transcription_related, Transcription regulator: SWI/SNF-BAF60b | 0.019475613 | TF family |
| octanoyltransferase activity | 0.021445977 | GO:0016415 |
| protein disulfide isomerase activity | 0.03922364 | GO:0003756 |
| microtubule-severing ATPase activity | 0.03922364 | GO:0008568 |
| Transcription_related, Transcription factor: C3H | 0.041171732 | TF family |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T000057 | AT1G04980 (2.00E-09) | ATPDI10|PROTEIN DISULFIDE ISOMERASE 10; ATPDIL2-2|PDI-like 2-2; PDI10|PROTEIN DISULFIDE ISOMERASE |
| CRO_T000170 | AT5G07950 (2.00E-61) | unknown protein |
| CRO_T012056 | AT1G64110 (0) | DAA1|DUO1-activated ATPase 1 |
| CRO_T014103 | AT5G01110 (1.00E-51) | Tetratricopeptide repeat (TPR)-like superfamily protein |
| CRO_T014526 | AT1G55170 (3.00E-55) | unknown protein |
| CRO_T016129 | - | - |
| CRO_T017828 | AT5G08430 (2.00E-33) | SWIB/MDM2 domain; Plus-3; GYF |
| CRO_T020307 | - | - |
| CRO_T020965 | - | - |
| CRO_T028192 | AT1G47578 (2.00E-92) | Biotin/lipoate A/B protein ligase family |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000232 | Lipoic acid metabolism lipoate biosynthesis and incorporation I xyloglucan biosynthesis protein lipoylation lipoate biosynthetic process cytoplasmic microtubule organization Protein_kinases_phosphatases, PPC:1.14.2: Receptor Like Cytoplasmic Kinase IX octanoyltransferase activity formation of glycosidic bonds, GlycosylTransferases: GTnc Transcription_related, Transcription factor: C3H response to stress microtubule-severing ATPase activity | details |
| TreatCFM000689 | S-adenosyl-L-methionine cycle II 2'-deoxymugineic acid phytosiderophore biosynthesis baicalein degradation (hydrogen peroxide detoxification) L-methionine degradation I (to L-homocysteine) L-methionine salvage cycle I (bacteria and plants) L-methionine salvage cycle II (plants) S-adenosyl-L-methionine biosynthesis wogonin metabolism | details |
Expression profiles
 Show details about module gene expression profiling |