TreatCFM000625's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Transcription_related, Transcription factor: AP2 | 0.005974501 | TF family |
| Transcription_related, Transcription factor: NF-YC | 0.005974501 | TF family |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T005750 | - | - |
| CRO_T009375 | AT5G65510 (6.00E-76) | AIL7|AINTEGUMENTA-like 7; PLT7|PLETHORA 7 |
| CRO_T009746 | - | - |
| CRO_T011110 | AT1G56170 (1.00E-19) | NF-YC2|nuclear factor Y, subunit C2 |
| CRO_T014770 | AT3G28020 (6.00E-12) | BEST Arabidopsis thaliana protein match is: DNA binding |
| CRO_T023372 | - | - |
| CRO_T027316 | - | - |
| CRO_T028039 | - | - |
| CRO_T029570 | - | - |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000135 | Photosynthesis plastid chloroplast photosystem II reaction center Mpp10 complex photosynthetic electron transport chain viral nucleocapsid photosystem I snoRNA binding rRNA binding chloroplast thylakoid membrane | details |
| TreatCFM000299 | L-tyrosine biosynthesis II Mannose type O-glycan biosyntheis Other types of O-glycan biosynthesis tyrosine biosynthetic process histone exchange regulation of nitric-oxide synthase activity | details |
| TreatCFM000770 | Photosynthesis glyoxylate cycle isocitrate lyase activity 11-beta-hydroxysteroid dehydrogenase (NADP+) activity transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer rRNA primary transcript binding formation of glycosidic bonds, GlycosylTransferases: GTnc snoRNA binding glyoxysome nuclear matrix photosystem II reaction center Mpp10 complex | details |
| TreatCFM000893 | extracellular space Lysosome cysteine-type endopeptidase activity proteolysis involved in cellular protein catabolic process lagging strand elongation DNA ligation involved in DNA repair protein ADP-ribosylation DNA ligase (ATP) activity rRNA primary transcript binding NAD+ ADP-ribosyltransferase activity nuclear matrix snoRNA binding Mpp10 complex rRNA processing Base excision repair viral nucleocapsid Ribosome biogenesis in eukaryotes small-subunit processome | details |
| TreatCFM000894 | formation of glycosidic bonds, GlycosylTransferases: GTnc Transcription_related, Transcription factor: B3 Transcription_related, Transcription factor: M-type | details |
| TreatCFM001358 | formation of glycosidic bonds, GlycosylTransferases: GTnc Other types of O-glycan biosynthesis | details |
Expression profiles
 Show details about module gene expression profiling |