TreatCFM000894's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| formation of glycosidic bonds, GlycosylTransferases: GTnc | 0.023928528 | cazy family |
| Transcription_related, Transcription factor: B3 | 0.023928528 | TF family |
| Transcription_related, Transcription factor: M-type | 0.023928528 | TF family |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T007049 | AT1G22110 (3.00E-10) | structural constituent of ribosome |
| CRO_T014248 | AT2G45660 (4.00E-22) | AGL20|AGAMOUS-like 20; ATSOC1|SUPPRESSOR OF OVEREXPRESSION OF CO 1 |
| CRO_T014770 | AT3G28020 (6.00E-12) | BEST Arabidopsis thaliana protein match is: DNA binding |
| CRO_T015405 | AT4G32010 (9.00E-15) | HSL1|HSI2-like 1; VAL2|VP1/ABI3-LIKE 2 |
| CRO_T020406 | AT3G27470 (3.00E-174) | Protein of unknown function (DUF707) |
| CRO_T028414 | AT5G01300 (1.00E-40) | PEBP (phosphatidylethanolamine-binding protein) family protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000135 | Photosynthesis plastid chloroplast photosystem II reaction center Mpp10 complex photosynthetic electron transport chain viral nucleocapsid photosystem I snoRNA binding rRNA binding chloroplast thylakoid membrane | details |
| TreatCFM000166 | D-aminoacyl-tRNA deacylase activity D-amino acid catabolic process | details |
| TreatCFM000248 | chromosomal part formation of glycosidic bonds, GlycosylTransferases: GTnc protein binding | details |
| TreatCFM000290 | vinorine synthase activity alkaloid metabolic process formation of glycosidic bonds, GlycosylTransferases: GTnc | details |
| TreatCFM000299 | L-tyrosine biosynthesis II Mannose type O-glycan biosyntheis Other types of O-glycan biosynthesis tyrosine biosynthetic process histone exchange regulation of nitric-oxide synthase activity | details |
| TreatCFM000556 | formation of glycosidic bonds, GlycosylTransferases: GTnc | details |
| TreatCFM000625 | Transcription_related, Transcription factor: AP2 Transcription_related, Transcription factor: NF-YC | details |
| TreatCFM000770 | Photosynthesis glyoxylate cycle isocitrate lyase activity 11-beta-hydroxysteroid dehydrogenase (NADP+) activity transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer rRNA primary transcript binding formation of glycosidic bonds, GlycosylTransferases: GTnc snoRNA binding glyoxysome nuclear matrix photosystem II reaction center Mpp10 complex | details |
| TreatCFM000893 | extracellular space Lysosome cysteine-type endopeptidase activity proteolysis involved in cellular protein catabolic process lagging strand elongation DNA ligation involved in DNA repair protein ADP-ribosylation DNA ligase (ATP) activity rRNA primary transcript binding NAD+ ADP-ribosyltransferase activity nuclear matrix snoRNA binding Mpp10 complex rRNA processing Base excision repair viral nucleocapsid Ribosome biogenesis in eukaryotes small-subunit processome | details |
Expression profiles
 Show details about module gene expression profiling |