TreatCFM000682's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| cellular potassium ion homeostasis | 0.011561932 | GO:0030007 |
| ncRNA processing | 0.011561932 | GO:0034470 |
| apigenin glycosides biosynthesis | 0.016167583 | plantCyc |
| genistin gentiobioside biosynthesis | 0.016167583 | plantCyc |
| kaempferol gentiobioside biosynthesis | 0.016167583 | plantCyc |
| luteolin glycosides biosynthesis | 0.016167583 | plantCyc |
| myricetin gentiobioside biosynthesis | 0.016167583 | plantCyc |
| curcumin glucoside biosynthesis | 0.027979603 | plantCyc |
| sesaminol glucoside biosynthesis | 0.027979603 | plantCyc |
| quercetin gentiotetraside biosynthesis | 0.033791043 | plantCyc |
| RNA transport | 0.03997025 | KEGG pathway |
| Transcription_related, Transcription factor: HSF | 0.046435402 | TF family |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T001994 | AT1G52810 (7.00E-25) | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
| CRO_T009320 | - | - |
| CRO_T013565 | AT1G74360 (0) | Leucine-rich repeat protein kinase family protein |
| CRO_T018109 | AT2G41690 (2.00E-42) | AT-HSFB3|heat shock transcription factor B3; HSFB3|HEAT SHOCK TRANSCRIPTION FACTOR B3 |
| CRO_T021951 | - | - |
| CRO_T027233 | AT5G49690 (1.00E-45) | UDP-Glycosyltransferase superfamily protein |
| CRO_T030030 | AT1G22470 (3.00E-05) | unknown protein |
| CRO_T030094 | AT4G18160 (1.00E-49) | ATKCO6|CA2+ ACTIVATED OUTWARD RECTIFYING K+ CHANNEL 6 |
| CRO_T033552 | AT2G47300 (6.00E-88) | POP1|similar to yeast POP1 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000015 | allantoin degradation to glyoxylate II allantoin degradation to ureidoglycolate II (ammonia producing) phytol salvage pathway | details |
| TreatCFM000060 | cellular potassium ion homeostasis plant-type vacuole membrane voltage-gated potassium channel activity Transcription_related, Transcription factor: B3 potassium ion transmembrane transport | details |
| TreatCFM000121 | sinapyl alcohol dehydrogenase activity cinnamyl-alcohol dehydrogenase activity geraniol and geranial biosynthesis Phenylpropanoid biosynthesis secologanin and strictosidine biosynthesis cellular potassium ion homeostasis voltage-gated potassium channel activity plant-type vacuole membrane zinc ion binding farnesylcysteine salvage pathway acetaldehyde biosynthesis I detoxification of reactive carbonyls in chloroplasts mannitol degradation II pyruvate fermentation to ethanol II traumatin and (Z)-3-hexen-1-yl acetate biosynthesis potassium ion transmembrane transport oxidation-reduction process | details |
| TreatCFM000271 | Transcription_related, Transcription regulator: SOH1 L-alanine degradation II (to D-lactate) L-glutamate degradation I Cell cycle - yeast plant-type vacuole membrane glutamate dehydrogenase [NAD(P)+] activity cellular potassium ion homeostasis regulation of protein kinase activity Cell cycle | details |
| TreatCFM000300 | Monoterpenoid biosynthesis mitochondrial translational termination cellular potassium ion homeostasis rescue of stalled ribosome interspecies interaction between organisms photosystem II repair photosystem II assembly 2-Oxocarboxylic acid metabolism primary root development translation release factor activity, codon nonspecific arginine biosynthetic process | details |
| TreatCFM000337 | details | |
| TreatCFM000445 | gibberellin biosynthesis III (early C-13 hydroxylation) regulation of protein kinase activity Cell cycle Cell cycle - yeast Diterpenoid biosynthesis cyclin-dependent protein serine/threonine kinase regulator activity cell division | details |
| TreatCFM000579 | mannose-6-phosphate isomerase activity nucleotidase activity Transcription_related, Transcription regulator: TAZ zinc ion binding cellular potassium ion homeostasis GDP-mannose biosynthetic process D-mannose degradation GDP-mannose biosynthesis guanosine nucleotides degradation I guanosine nucleotides degradation II mannitol biosynthesis transcription cofactor activity voltage-gated potassium channel activity histone acetyltransferase activity L-ascorbate biosynthesis I (L-galactose pathway) mannitol degradation II pyrimidine salvage pathway adenosine nucleotides degradation I | details |
| TreatCFM000580 | Transcription_related, Transcription regulator: TAZ nucleotidase activity guanosine nucleotides degradation I guanosine nucleotides degradation II pyrimidine salvage pathway cellular potassium ion homeostasis adenosine nucleotides degradation I transcription cofactor activity histone acetyltransferase activity voltage-gated potassium channel activity Ubiquitin_Proteasome_system, E3 adaptor: BTB histone acetylation embryo sac development plant-type vacuole membrane potassium ion transmembrane transport pollen development Purine metabolism calmodulin binding dephosphorylation | details |
Expression profiles
 Show details about module gene expression profiling |