TreatCFM000579's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| mannose-6-phosphate isomerase activity | 0.016373598 | GO:0004476 |
| nucleotidase activity | 0.016373598 | GO:0008252 |
| Transcription_related, Transcription regulator: TAZ | 0.016555498 | TF family |
| zinc ion binding | 0.02929062 | GO:0008270 |
| cellular potassium ion homeostasis | 0.029402093 | GO:0030007 |
| GDP-mannose biosynthetic process | 0.029402093 | GO:0009298 |
| D-mannose degradation | 0.030612189 | plantCyc |
| GDP-mannose biosynthesis | 0.030612189 | plantCyc |
| guanosine nucleotides degradation I | 0.030612189 | plantCyc |
| guanosine nucleotides degradation II | 0.030612189 | plantCyc |
| mannitol biosynthesis | 0.030612189 | plantCyc |
| transcription cofactor activity | 0.030825768 | GO:0003712 |
| voltage-gated potassium channel activity | 0.030825768 | GO:0005249 |
| histone acetyltransferase activity | 0.030825768 | GO:0004402 |
| L-ascorbate biosynthesis I (L-galactose pathway) | 0.033410985 | plantCyc |
| mannitol degradation II | 0.033410985 | plantCyc |
| pyrimidine salvage pathway | 0.033410985 | plantCyc |
| adenosine nucleotides degradation I | 0.03953282 | plantCyc |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T001397 | - | - |
| CRO_T002806 | AT1G51290 (5.00E-05) | F-box and associated interaction domains-containing protein |
| CRO_T004000 | - | - |
| CRO_T005335 | - | - |
| CRO_T005541 | - | - |
| CRO_T008724 | AT2G26470 (9.00E-63) | unknown protein |
| CRO_T011632 | - | - |
| CRO_T011716 | - | - |
| CRO_T013763 | - | - |
| CRO_T015419 | - | - |
| CRO_T015652 | - | - |
| CRO_T022454 | AT5G16960 (1.00E-16) | Zinc-binding dehydrogenase family protein |
| CRO_T024215 | AT4G10500 (5.00E-23) | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
| CRO_T027055 | - | - |
| CRO_T030086 | AT3G02570 (4.00E-102) | MEE31|MATERNAL EFFECT EMBRYO ARREST 31; PMI1|PHOSPHOMANNOSE ISOMERASE 1 |
| CRO_T030094 | AT4G18160 (1.00E-49) | ATKCO6|CA2+ ACTIVATED OUTWARD RECTIFYING K+ CHANNEL 6 |
| CRO_T031719 | AT1G72880 (3.00E-111) | Survival protein SurE-like phosphatase/nucleotidase |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000015 | allantoin degradation to glyoxylate II allantoin degradation to ureidoglycolate II (ammonia producing) phytol salvage pathway | details |
| TreatCFM000060 | cellular potassium ion homeostasis plant-type vacuole membrane voltage-gated potassium channel activity Transcription_related, Transcription factor: B3 potassium ion transmembrane transport | details |
| TreatCFM000121 | sinapyl alcohol dehydrogenase activity cinnamyl-alcohol dehydrogenase activity geraniol and geranial biosynthesis Phenylpropanoid biosynthesis secologanin and strictosidine biosynthesis cellular potassium ion homeostasis voltage-gated potassium channel activity plant-type vacuole membrane zinc ion binding farnesylcysteine salvage pathway acetaldehyde biosynthesis I detoxification of reactive carbonyls in chloroplasts mannitol degradation II pyruvate fermentation to ethanol II traumatin and (Z)-3-hexen-1-yl acetate biosynthesis potassium ion transmembrane transport oxidation-reduction process | details |
| TreatCFM000271 | Transcription_related, Transcription regulator: SOH1 L-alanine degradation II (to D-lactate) L-glutamate degradation I Cell cycle - yeast plant-type vacuole membrane glutamate dehydrogenase [NAD(P)+] activity cellular potassium ion homeostasis regulation of protein kinase activity Cell cycle | details |
| TreatCFM000300 | Monoterpenoid biosynthesis mitochondrial translational termination cellular potassium ion homeostasis rescue of stalled ribosome interspecies interaction between organisms photosystem II repair photosystem II assembly 2-Oxocarboxylic acid metabolism primary root development translation release factor activity, codon nonspecific arginine biosynthetic process | details |
| TreatCFM000337 | details | |
| TreatCFM000580 | Transcription_related, Transcription regulator: TAZ nucleotidase activity guanosine nucleotides degradation I guanosine nucleotides degradation II pyrimidine salvage pathway cellular potassium ion homeostasis adenosine nucleotides degradation I transcription cofactor activity histone acetyltransferase activity voltage-gated potassium channel activity Ubiquitin_Proteasome_system, E3 adaptor: BTB histone acetylation embryo sac development plant-type vacuole membrane potassium ion transmembrane transport pollen development Purine metabolism calmodulin binding dephosphorylation | details |
| TreatCFM000682 | cellular potassium ion homeostasis ncRNA processing apigenin glycosides biosynthesis genistin gentiobioside biosynthesis kaempferol gentiobioside biosynthesis luteolin glycosides biosynthesis myricetin gentiobioside biosynthesis curcumin glucoside biosynthesis sesaminol glucoside biosynthesis quercetin gentiotetraside biosynthesis RNA transport Transcription_related, Transcription factor: HSF | details |
| TreatCFM001500 | Transcription_related, Transcription factor: bZIP inositol phosphate dephosphorylation inositol metabolic process inositol monophosphate 1-phosphatase activity phosphatidylinositol phosphorylation Plant hormone signal transduction | details |
| TreatCFM001779 | developmental process involved in reproduction detection of nutrient organ senescence vegetative phase change regulation of cellular metabolic process L-malate dehydrogenase activity protein tyrosine kinase activity glyoxylate cycle TCA cycle II (plants and fungi) sugar mediated signaling pathway Apelin signaling pathway primary root development gluconeogenesis I malate metabolic process tricarboxylic acid cycle zinc ion binding peptidyl-tyrosine phosphorylation abscisic acid-activated signaling pathway | details |
Expression profiles
 Show details about module gene expression profiling |