TreatCFM000739's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| reactive oxygen species degradation | 0.004251233 | plantCyc |
| superoxide radicals degradation | 0.004251233 | plantCyc |
| formation of glycosidic bonds, GlycosylTransferases: GTnc | 0.004260598 | cazy family |
| Peroxisome | 0.006014577 | KEGG pathway |
| removal of superoxide radicals | 0.014614695 | GO:0019430 |
| Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII | 0.0194503 | kinase family |
| peptidyl-tyrosine phosphorylation | 0.020904439 | GO:0018108 |
| superoxide dismutase activity | 0.033857951 | GO:0004784 |
| non-membrane spanning protein tyrosine kinase activity | 0.039017827 | GO:0004715 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T004849 | AT4G26050 (3.00E-40) | PIRL8|plant intracellular ras group-related LRR 8 |
| CRO_T010421 | AT3G53700 (5.00E-31) | MEE40|maternal effect embryo arrest 40 |
| CRO_T012447 | AT4G03620 (2.00E-59) | myosin heavy chain-related |
| CRO_T016655 | AT1G08830 (3.00E-63) | CSD1|copper/zinc superoxide dismutase 1 |
| CRO_T025543 | AT1G20650 (1.00E-78) | ASG5|ALTERED SEED GERMINATION 5 |
| CRO_T033384 | AT1G63130 (3.00E-31) | Tetratricopeptide repeat (TPR)-like superfamily protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM001691 | reactive oxygen species degradation superoxide radicals degradation superoxide dismutase activity removal of superoxide radicals formation of glycosidic bonds, GlycosylTransferases: GTnc stomatal complex development regulation of tocopherol cyclase activity stomatal complex patterning oxaloacetate metabolic process glycolipid metabolic process fatty acid biosynthesis initiation I S-methyl-5-thio-α-D-ribose 1-phosphate degradation octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) protein stabilization DNA-directed RNA polymerase IV complex DNA-directed RNA polymerase V complex Alanine, aspartate and glutamate metabolism MAPK signaling pathway - fly omega-amidase activity glucosyltransferase activity oligopeptide transport nitrogen compound metabolic process malate metabolic process RNA polymerase II activity acetyl-CoA carboxylase activity Peroxisome acetyl-CoA carboxylase complex | details |
Expression profiles
 Show details about module gene expression profiling |