TreatCFM000802's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Ubiquitin mediated proteolysis | 0.000211482 | KEGG pathway |
| protein complex | 0.017361257 | GO:0043234 |
| integral component of membrane | 0.017361257 | GO:0016021 |
| calmodulin binding | 0.043906739 | GO:0005516 |
| lipid binding | 0.043906739 | GO:0008289 |
| Ubiquitin_Proteasome_system, E3 adaptor: DWD | 0.046777058 | ubs family |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T003255 | AT3G43590 (7.00E-10) | zinc knuckle (CCHC-type) family protein |
| CRO_T008126 | - | - |
| CRO_T010566 | AT2G21010 (2.00E-15) | Calcium-dependent lipid-binding (CaLB domain) family protein |
| CRO_T013330 | AT5G41580 (9.00E-05) | RING/U-box superfamily protein |
| CRO_T013801 | - | - |
| CRO_T019101 | AT1G26700 (0) | ATMLO14|MILDEW RESISTANCE LOCUS O 14 |
| CRO_T023432 | AT1G15220 (2.00E-52) | ATCCMH; CCMH|cytochrome c biogenesis protein family |
| CRO_T029628 | AT5G54530 (3.00E-22) | Protein of unknown function, DUF538 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000165 | stachyose degradation multi-eIF complex eukaryotic translation initiation factor 2 complex Ribosome adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc eukaryotic translation initiation factor 2B complex mannan catabolic process translation protein import into nucleus xylan catabolic process maturation of LSU-rRNA | details |
| TreatCFM000475 | 5-aminoimidazole ribonucleotide biosynthesis I cuticular wax biosynthesis tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate glycolipid metabolic process alkane biosynthetic process cuticle hydrocarbon biosynthetic process cytoskeleton-dependent intracellular transport wax biosynthetic process regulation of microtubule-based process protein localization lagging strand elongation DNA ligation involved in DNA repair pollen sperm cell differentiation 'de novo' IMP biosynthetic process formation of glycosidic bonds, GlycosylTransferases: GTnc vacuole tRNA (guanine(37)-N(1))-methyltransferase activity glucosyltransferase activity phosphoribosylglycinamide formyltransferase activity alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity trehalose biosynthetic process hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc Transcription_related, Transcription regulator: GNAT ATP-dependent microtubule motor activity, plus-end-directed DNA ligase (ATP) activity | details |
Expression profiles
 Show details about module gene expression profiling |