TreatCFM000839's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Protein_kinases_phosphatases, PPC:4.5.1.1: Male grem cell-associated kinase (mak) | 0.000886315 | kinase family |
| imidazoleglycerol-phosphate synthase activity | 0.004342945 | GO:0000107 |
| oxo-acid-lyase activity | 0.004342945 | GO:0016833 |
| 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity | 0.004342945 | GO:0003949 |
| L-glutamine degradation I | 0.007519668 | plantCyc |
| L-histidine biosynthesis | 0.007519668 | plantCyc |
| mitochondrial proton-transporting ATP synthase complex assembly | 0.010118766 | GO:0033615 |
| histidine biosynthetic process | 0.016848918 | GO:0000105 |
| Biosynthesis of amino acids | 0.027437519 | KEGG pathway |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T001534 | AT2G34050 (6.00E-37) | INVOLVED IN: protein complex assembly |
| CRO_T004384 | - | - |
| CRO_T004473 | AT2G28105 (1.00E-18) | |
| CRO_T013239 | - | - |
| CRO_T015311 | AT4G13020 (2.00E-91) | MHK|Protein kinase superfamily protein |
| CRO_T017464 | AT2G47620 (3.00E-30) | ATSWI3A|SWITCH/sucrose nonfermenting 3A |
| CRO_T022344 | AT4G26900 (1.00E-128) | AT-HF|HIS HF |
| CRO_T025580 | AT1G70510 (2.00E-31) | ATK1|KN 1; KNAT2|KNOTTED-like from 2 |
| CRO_T027597 | - | - |
| CRO_T029440 | AT2G46000 (2.00E-42) | unknown protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000512 | 6,7-dimethyl-8-ribityllumazine synthase activity sequence-specific DNA binding flavin biosynthesis I (bacteria and plants) Riboflavin metabolism nucleus riboflavin synthase complex regulation of transcription, DNA-templated riboflavin biosynthetic process Transcription_related, Transcription factor: HB | details |
| TreatCFM000697 | Protein_kinases_phosphatases, PPC:4.5.1.1: Male grem cell-associated kinase (mak) integral component of plasma membrane ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism imidazoleglycerol-phosphate synthase activity 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity oxo-acid-lyase activity L-glutamine degradation I L-histidine biosynthesis cation-transporting ATPase activity Biosynthesis of amino acids histidine biosynthetic process cation transmembrane transport glucose import proton transport glucose transmembrane transport glucose transmembrane transporter activity sugar:proton symporter activity | details |
| TreatCFM000698 | oxo-acid-lyase activity 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity omega peptidase activity imidazoleglycerol-phosphate synthase activity Ubiquitin_Proteasome_system, DUB: Josephin L-glutamine degradation I L-histidine biosynthesis thiol-dependent ubiquitin-specific protease activity transferase activity, transferring hexosyl groups histidine biosynthetic process protein deubiquitination Biosynthesis of amino acids | details |
| TreatCFM001334 | mitochondrial respiratory chain complex IV assembly biotin biosynthetic process adenosylmethionine-8-amino-7-oxononanoate transaminase activity dethiobiotin synthase activity Biotin metabolism mitochondrion | details |
| TreatCFM001468 | Protein_kinases_phosphatases, PPC:4.5.1.1: Male grem cell-associated kinase (mak) L-glutamine degradation I L-histidine biosynthesis ligase activity 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity oxo-acid-lyase activity galactosylxylosylprotein 3-beta-galactosyltransferase activity imidazoleglycerol-phosphate synthase activity protein O-linked glycosylation via hydroxyproline arabinogalactan protein metabolic process Transcription_related, Transcription factor: MIKC formation of glycosidic bonds, GlycosylTransferases: GTnc | details |
| TreatCFM001897 | protein folding imidazoleglycerol-phosphate synthase activity oxo-acid-lyase activity 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity L-glutamine degradation I L-histidine biosynthesis Transcription_related, Transcription factor: NF-YB ribosome assembly NOD-like receptor signaling pathway histidine biosynthetic process sulfate assimilation cellular response to oxidative stress protein peptidyl-prolyl isomerization oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor Ubiquitin_Proteasome_system, E3: U-box Biosynthesis of amino acids Ubiquitin mediated proteolysis protein disulfide oxidoreductase activity peptidyl-prolyl cis-trans isomerase activity protein heterodimerization activity cell redox homeostasis cytoplasm | details |
Expression profiles
 Show details about module gene expression profiling |