TreatCFM000857's detailed annotation
|
Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| nucleocytoplasmic transport | 0.012871389 | GO:0006913 |
| RNA transport | 0.026828752 | KEGG pathway |
| calmodulin-dependent protein kinase activity | 0.038474333 | GO:0004683 |
| calcium-dependent protein serine/threonine kinase activity | 0.038474333 | GO:0009931 |
| Ran GTPase binding | 0.038474333 | GO:0008536 |
| protein autophosphorylation | 0.0424824 | GO:0046777 |
| peptidyl-serine phosphorylation | 0.0424824 | GO:0018105 |
| abscisic acid-activated signaling pathway | 0.0424824 | GO:0009738 |
| Protein_kinases_phosphatases, PPC:4.2.1: Calcium Dependent Protein Kinase | 0.042766462 | kinase family |
| protein transporter activity | 0.048978727 | GO:0008565 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T012937 | AT1G17230 (0) | Leucine-rich receptor-like protein kinase family protein |
| CRO_T012938 | AT1G76750 (3.00E-28) | EC1.1|EGG CELL 1.1 |
| CRO_T018520 | AT2G37230 (0) | Tetratricopeptide repeat (TPR)-like superfamily protein |
| CRO_T022384 | AT3G08943 (0) | ARM repeat superfamily protein |
| CRO_T027334 | AT2G46710 (2.00E-118) | ROPGAP3|ROP guanosine triphosphatase (GTPase)-activating protein 3 |
| CRO_T027645 | AT1G49580 (0) | Calcium-dependent protein kinase (CDPK) family protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM001680 | Cytochrome_P450, Cytochrome P450: CYP707A formation of glycosidic bonds, GlycosylTransferases: GTnc Carotenoid biosynthesis cytokinins 7-N-glucoside biosynthesis cytokinins 9-N-glucoside biosynthesis phaseic acid biosynthesis (+)-abscisic acid 8'-hydroxylase activity guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity GTP diphosphokinase activity quercetin glucoside biosynthesis (Allium) quercetin gentiotetraside biosynthesis guanosine tetraphosphate metabolic process response to starvation brassinosteroid homeostasis brassinosteroid biosynthetic process sterol metabolic process multicellular organism development | details |
| TreatCFM001719 | Phenylalanine metabolism 4-hydroxybenzoate biosynthesis I (eukaryotes) umbelliferone biosynthesis hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc Transcription_related, Transcription factor: MYB-related Flavonoid biosynthesis jasmonic acid biosynthesis xyloglucan metabolic process water transport glycerol transport cellular water homeostasis cell wall biogenesis ion transmembrane transport xyloglucan:xyloglucosyl transferase activity water channel activity glycerol channel activity Phenylpropanoid biosynthesis carbohydrate binding ligase activity hydrolase activity, hydrolyzing O-glycosyl compounds | details |
| TreatCFM002135 | pyrimidine ribonucleosides salvage I Protein_kinases_phosphatases, PPC:4.2.1: Calcium Dependent Protein Kinase ATP binding SUMO activating enzyme activity calmodulin-dependent protein kinase activity calcium-dependent protein serine/threonine kinase activity regulation of mitotic cell cycle protein sumoylation | details |
Expression profiles
 Show details about module gene expression profiling |