TreatCFM001680's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Cytochrome_P450, Cytochrome P450: CYP707A | 0.001595391 | CYP450 family |
| formation of glycosidic bonds, GlycosylTransferases: GTnc | 0.001595391 | cazy family |
| Carotenoid biosynthesis | 0.005838109 | KEGG pathway |
| cytokinins 7-N-glucoside biosynthesis | 0.013477937 | plantCyc |
| cytokinins 9-N-glucoside biosynthesis | 0.013477937 | plantCyc |
| phaseic acid biosynthesis | 0.013477937 | plantCyc |
| (+)-abscisic acid 8'-hydroxylase activity | 0.013843434 | GO:0010295 |
| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity | 0.013843434 | GO:0008893 |
| GTP diphosphokinase activity | 0.013843434 | GO:0008728 |
| quercetin glucoside biosynthesis (Allium) | 0.015655373 | plantCyc |
| quercetin gentiotetraside biosynthesis | 0.01896602 | plantCyc |
| guanosine tetraphosphate metabolic process | 0.033730906 | GO:0015969 |
| response to starvation | 0.033730906 | GO:0042594 |
| brassinosteroid homeostasis | 0.035233008 | GO:0010268 |
| brassinosteroid biosynthetic process | 0.035233008 | GO:0016132 |
| sterol metabolic process | 0.035233008 | GO:0016125 |
| multicellular organism development | 0.047421848 | GO:0007275 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T002572 | AT1G07350 (5.00E-33) | SR45a|serine/arginine rich-like protein 45a |
| CRO_T002814 | AT4G19230 (3.00E-145) | CYP707A1|cytochrome P450, family 707, subfamily A, polypeptide 1 |
| CRO_T005194 | AT1G54130 (6.00E-26) | ATRSH3|RELA/SPOT HOMOLOG 3 |
| CRO_T005896 | AT1G69800 (3.00E-146) | Cystathionine beta-synthase (CBS) protein |
| CRO_T010949 | AT3G11340 (4.00E-104) | UGT76B1|UDP-dependent glycosyltransferase 76B1 |
| CRO_T018520 | AT2G37230 (0) | Tetratricopeptide repeat (TPR)-like superfamily protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000804 | Carotenoid biosynthesis Cytochrome_P450, Cytochrome P450: CYP707A neurosporene biosynthesis phaseic acid biosynthesis Transcription_related, Transcription factor: OFP trans-lycopene biosynthesis II (plants) 9,9'-dicis-carotene:quinone oxidoreductase activity transmembrane signaling receptor activity (+)-abscisic acid 8'-hydroxylase activity carotene 7,8-desaturase activity 7,9,9'-tricis-neurosporene:quinone oxidoreductase activity chromoplast carotenoid biosynthetic process de-etiolation 9,9'-di-cis-zeta-carotene desaturation to 7,9,7',9'-tetra-cis-lycopene transmembrane transporter activity brassinosteroid homeostasis sterol metabolic process brassinosteroid biosynthetic process multicellular organism development | details |
| TreatCFM000857 | nucleocytoplasmic transport RNA transport calmodulin-dependent protein kinase activity calcium-dependent protein serine/threonine kinase activity Ran GTPase binding protein autophosphorylation peptidyl-serine phosphorylation abscisic acid-activated signaling pathway Protein_kinases_phosphatases, PPC:4.2.1: Calcium Dependent Protein Kinase protein transporter activity | details |
| TreatCFM001719 | Phenylalanine metabolism 4-hydroxybenzoate biosynthesis I (eukaryotes) umbelliferone biosynthesis hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc Transcription_related, Transcription factor: MYB-related Flavonoid biosynthesis jasmonic acid biosynthesis xyloglucan metabolic process water transport glycerol transport cellular water homeostasis cell wall biogenesis ion transmembrane transport xyloglucan:xyloglucosyl transferase activity water channel activity glycerol channel activity Phenylpropanoid biosynthesis carbohydrate binding ligase activity hydrolase activity, hydrolyzing O-glycosyl compounds | details |
| TreatCFM001885 | mature ribosome assembly translational elongation Ribosome biogenesis in eukaryotes | details |
Expression profiles
 Show details about module gene expression profiling |