TreatCFM001719's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Phenylalanine metabolism | 0.002480253 | KEGG pathway |
| 4-hydroxybenzoate biosynthesis I (eukaryotes) | 0.017188179 | plantCyc |
| umbelliferone biosynthesis | 0.017188179 | plantCyc |
| hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc | 0.0194503 | cazy family |
| Transcription_related, Transcription factor: MYB-related | 0.0194503 | TF family |
| Flavonoid biosynthesis | 0.020187054 | KEGG pathway |
| jasmonic acid biosynthesis | 0.020187054 | plantCyc |
| xyloglucan metabolic process | 0.025522569 | GO:0010411 |
| water transport | 0.025522569 | GO:0006833 |
| glycerol transport | 0.025522569 | GO:0015793 |
| cellular water homeostasis | 0.025522569 | GO:0009992 |
| cell wall biogenesis | 0.025522569 | GO:0042546 |
| ion transmembrane transport | 0.025522569 | GO:0034220 |
| xyloglucan:xyloglucosyl transferase activity | 0.026876962 | GO:0016762 |
| water channel activity | 0.026876962 | GO:0015250 |
| glycerol channel activity | 0.026876962 | GO:0015254 |
| Phenylpropanoid biosynthesis | 0.027397664 | KEGG pathway |
| carbohydrate binding | 0.049185843 | GO:0030246 |
| ligase activity | 0.049185843 | GO:0016874 |
| hydrolase activity, hydrolyzing O-glycosyl compounds | 0.049544063 | GO:0004553 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T002056 | AT4G37800 (4.00E-135) | XTH7|xyloglucan endotransglucosylase/hydrolase 7 |
| CRO_T003111 | AT1G61215 (1.00E-85) | BRD4|bromodomain 4 |
| CRO_T012200 | AT3G15810 (8.00E-21) | Protein of unknown function (DUF567) |
| CRO_T018520 | AT2G37230 (0) | Tetratricopeptide repeat (TPR)-like superfamily protein |
| CRO_T023152 | AT3G54820 (3.00E-134) | PIP2; 5|plasma membrane intrinsic protein 2; 5; PIP2D|PLASMA MEMBRANE INTRINSIC PROTEIN 2D |
| CRO_T029291 | AT4G05160 (0) | AMP-dependent synthetase and ligase family protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000295 | nuclear-transcribed mRNA catabolic process large ribosomal subunit rRNA binding cytoplasmic translation ribosomal large subunit assembly rRNA processing Transcription_related, Transcription factor: C2C2-Dof Transcription_related, Transcription factor: MYB-related preribosome, large subunit precursor Transcription_related, Transcription factor: C2H2 cytosolic large ribosomal subunit nucleolus | details |
| TreatCFM000857 | nucleocytoplasmic transport RNA transport calmodulin-dependent protein kinase activity calcium-dependent protein serine/threonine kinase activity Ran GTPase binding protein autophosphorylation peptidyl-serine phosphorylation abscisic acid-activated signaling pathway Protein_kinases_phosphatases, PPC:4.2.1: Calcium Dependent Protein Kinase protein transporter activity | details |
| TreatCFM001135 | hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc Transcription_related, Transcription factor: MYB-related xyloglucan metabolic process cell wall biogenesis Plant hormone signal transduction xyloglucan:xyloglucosyl transferase activity hydrolase activity, hydrolyzing O-glycosyl compounds carbohydrate binding defense response | details |
| TreatCFM001680 | Cytochrome_P450, Cytochrome P450: CYP707A formation of glycosidic bonds, GlycosylTransferases: GTnc Carotenoid biosynthesis cytokinins 7-N-glucoside biosynthesis cytokinins 9-N-glucoside biosynthesis phaseic acid biosynthesis (+)-abscisic acid 8'-hydroxylase activity guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity GTP diphosphokinase activity quercetin glucoside biosynthesis (Allium) quercetin gentiotetraside biosynthesis guanosine tetraphosphate metabolic process response to starvation brassinosteroid homeostasis brassinosteroid biosynthetic process sterol metabolic process multicellular organism development | details |
Expression profiles
 Show details about module gene expression profiling |