TreatCFM000924's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Cdc73/Paf1 complex | 0.003190782 | GO:0016593 |
| histone methylation | 0.007815683 | GO:0016571 |
| negative regulation of flower development | 0.007815683 | GO:0009910 |
| regulation of histone H3-K4 methylation | 0.007815683 | GO:0051569 |
| RNA polymerase II core binding | 0.008096328 | GO:0000993 |
| Fatty acid metabolism | 0.010593591 | KEGG pathway |
| Transcription_related, Transcription factor: WRKY | 0.023810781 | TF family |
| Transcription_related, Transcription regulator: PHD | 0.023810781 | TF family |
| positive regulation of transcription, DNA-templated | 0.027288276 | GO:0045893 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T013970 | AT1G13310 (7.00E-80) | Endosomal targeting BRO1-like domain-containing protein |
| CRO_T022704 | AT2G06210 (0) | ELF8|EARLY FLOWERING 8; VIP6|VERNALIZATION INDEPENDENCE 6 |
| CRO_T027301 | AT5G24330 (4.00E-107) | ATXR6|ARABIDOPSIS TRITHORAX-RELATED PROTEIN 6; SDG34|SET DOMAIN PROTEIN 34 |
| CRO_T028604 | - | - |
| CRO_T031937 | - | - |
| CRO_T031986 | AT1G55600 (1.00E-19) | MINI3|MINISEED 3; WRKY10|WRKY DNA-binding protein 10 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000567 | Transcription_related, Transcription factor: WRKY phaseic acid biosynthesis Cytochrome_P450, Cytochrome P450: CYP87A Transcription_related, Transcription factor: EIL Transcription_related, Transcription factor: NF-YB mitochondrial proton-transporting ATP synthase complex proton-transporting ATP synthase complex, coupling factor F(o) regulation of transcription, DNA-templated mitochondrial ATP synthesis coupled proton transport cellular respiration xenobiotic transport | details |
| TreatCFM000878 | Transcription_related, Transcription factor: WRKY Transcription_related, Transcription factor: EIL transcription factor activity, sequence-specific DNA binding regulation of transcription, DNA-templated MAPK signaling pathway - plant sequence-specific DNA binding | details |
| TreatCFM000982 | D-myo-inositol-5-phosphate metabolism phytate degradation I Transcription_related, Transcription regulator: PHD peptidyl-tyrosine dephosphorylation Glycolysis / Gluconeogenesis Inositol phosphate metabolism Plant-pathogen interaction protein tyrosine phosphatase activity acid phosphatase activity dephosphorylation | details |
| TreatCFM001247 | histone methylation regulation of histone H3-K4 methylation negative regulation of flower development Cdc73/Paf1 complex myosin complex RNA polymerase II core binding DNA topoisomerase type I activity motor activity Fatty acid metabolism positive regulation of transcription, DNA-templated actin binding membrane | details |
| TreatCFM001559 | homogalacturonan biosynthesis Amino sugar and nucleotide sugar metabolism pectin biosynthetic process polygalacturonate 4-alpha-galacturonosyltransferase activity formation of glycosidic bonds, GlycosylTransferases: GTnc Transcription_related, Transcription factor: WRKY Transcription_related, Transcription regulator: PHD Golgi membrane | details |
Expression profiles
 Show details about module gene expression profiling |