TreatCFM001071's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Cytochrome_P450, Cytochrome P450: CYP704A | 0.001462766 | CYP450 family |
| Ubiquitin_Proteasome_system, DUB: Josephin | 0.001462766 | ubs family |
| GABAergic synapse | 0.001595037 | KEGG pathway |
| Protein_kinases_phosphatases, PPC:1.15.1: Receptor Like Cytoplasmic Kinase I | 0.001625055 | kinase family |
| anion transport | 0.02225339 | GO:0006820 |
| integral component of membrane | 0.026215398 | GO:0016021 |
| vacuolar membrane | 0.029548347 | GO:0005774 |
| amino acid transmembrane transport | 0.043392548 | GO:0003333 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T014408 | AT1G05970 (3.00E-52) | RNA-binding (RRM/RBD/RNP motifs) family protein |
| CRO_T020980 | AT2G40270 (3.00E-112) | Protein kinase family protein |
| CRO_T021081 | AT2G45510 (2.00E-144) | CYP704A2|cytochrome P450, family 704, subfamily A, polypeptide 2 |
| CRO_T024620 | AT3G09330 (2.00E-95) | Transmembrane amino acid transporter family protein |
| CRO_T029635 | AT5G08500 (5.00E-82) | Transmembrane CLPTM1 family protein |
| CRO_T032136 | AT3G47420 (0) | AtG3Pp1|Glycerol-3-phosphate permease 1; ATPS3|phosphate starvation-induced gene 3 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000685 | GABAergic synapse amino acid transmembrane transporter activity amino acid transmembrane transport Ubiquitin_Proteasome_system, DUB: Josephin secologanin and strictosidine biosynthesis (-)-secologanin biosynthetic process quercetin 3-O-glucosyltransferase activity quercetin 7-O-glucosyltransferase activity flavonoid biosynthetic process flavonoid glucuronidation | details |
| TreatCFM000708 | Protein_kinases_phosphatases, PPC:1.15.1: Receptor Like Cytoplasmic Kinase I chloroplast RNA modification carbohydrate transmembrane transport leaf vascular tissue pattern formation phloem or xylem histogenesis cotyledon vascular tissue pattern formation mRNA processing Transcription_related, Transcription factor: C2H2 phosphatidylcholine acyl editing phospholipases triacylglycerol degradation | details |
| TreatCFM000714 | steroid biosynthetic process 3-beta-hydroxy-delta5-steroid dehydrogenase activity coenzyme binding Prion diseases Protein_kinases_phosphatases, PPC:1.15.1: Receptor Like Cytoplasmic Kinase I L-aspartate:fumarate oxidoreductase activity L-aspartate oxidase activity Alanine, aspartate and glutamate metabolism Mismatch repair formaldehyde oxidation II (glutathione-dependent) NAD biosynthesis I (from aspartate) phenylethanol biosynthesis | details |
| TreatCFM001009 | metallopeptidase activity Glutathione metabolism adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 alpha-glucan, water dikinase activity ATPase activator activity 6-phosphofructokinase complex cold acclimation positive regulation of ATPase activity fructose 6-phosphate metabolic process glycolytic process through fructose-6-phosphate proteolysis starch catabolic process 6-phosphofructokinase activity protein histidine kinase activity peptidyl-histidine phosphorylation chaperone binding glycolysis I (from glucose 6-phosphate) glycolysis IV (plant cytosol) zinc ion binding response to stress metal ion binding | details |
| TreatCFM001840 | GABAergic synapse amino acid transmembrane transporter activity amino acid transmembrane transport Ubiquitin_Proteasome_system, DUB: Josephin integral component of membrane vacuolar membrane 1-acylglycerol-3-phosphate O-acyltransferase activity aromatic amino acid family metabolic process Tyrosine metabolism phospholipid biosynthetic process glutathione transferase activity CDP-diacylglycerol biosynthesis I diacylglycerol and triacylglycerol biosynthesis glutathione metabolic process Photosynthesis | details |
Expression profiles
 Show details about module gene expression profiling |