TreatCFM001116's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Protein_kinases_phosphatases, PPC:4.5.4: GSK3/Shaggy Like Protein Kinase Family | 0.002480253 | kinase family |
| uridylyltransferase activity | 0.002955301 | GO:0070569 |
| ErbB signaling pathway | 0.003722304 | KEGG pathway |
| stachyose degradation | 0.008113278 | plantCyc |
| sucrose biosynthesis II | 0.008113278 | plantCyc |
| UDP-glucose biosynthesis | 0.008113278 | plantCyc |
| Pentose and glucuronate interconversions | 0.025357101 | KEGG pathway |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T002762 | AT1G09580 (4.00E-13) | emp24/gp25L/p24 family/GOLD family protein |
| CRO_T005319 | AT3G03600 (4.00E-70) | RPS2|ribosomal protein S2 |
| CRO_T018805 | AT5G27520 (3.00E-131) | PNC2|peroxisomal adenine nucleotide carrier 2 |
| CRO_T020275 | AT4G14620 (1.00E-78) | Protein of unknown function (DUF506) |
| CRO_T022095 | AT1G09840 (0) | ATSK41|shaggy-like protein kinase 41; HIR1|hypersensitive induced reaction 1 |
| CRO_T032938 | AT4G38670 (2.00E-97) | Pathogenesis-related thaumatin superfamily protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM001063 | plant sterol biosynthesis sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) activity maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) 3-beta-hydroxy-delta5-steroid dehydrogenase activity steroid biosynthetic process ribosomal large subunit assembly Protein processing in endoplasmic reticulum unfolded protein binding protein serine/threonine phosphatase activity response to stress | details |
| TreatCFM001236 | integral component of membrane tau-protein kinase activity Protein_kinases_phosphatases, PPC:1.12.3: Leucine Rich Repeat Kinase VII glucan endo-1,3-beta-D-glucosidase activity adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc | details |
| TreatCFM001769 | glycosaminoglycan biosynthetic process heme a biosynthetic process heparan sulfate proteoglycan biosynthetic process respiratory chain complex IV assembly formation of glycosidic bonds, GlycosylTransferases: GTnc Protein_kinases_phosphatases, PPC:4.4.1: Unknown Function Kinase oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor oxidoreductase activity, acting on the CH-CH group of donors ADP binding cytochrome-c oxidase activity | details |
Expression profiles
 Show details about module gene expression profiling |