TreatCFM001236's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| integral component of membrane | 0.004654614 | GO:0016021 |
| tau-protein kinase activity | 0.010119663 | GO:0050321 |
| Protein_kinases_phosphatases, PPC:1.12.3: Leucine Rich Repeat Kinase VII | 0.010339733 | kinase family |
| glucan endo-1,3-beta-D-glucosidase activity | 0.014158109 | GO:0042973 |
| adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 | 0.026495719 | cazy family |
| hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc | 0.026495719 | cazy family |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T002079 | AT2G05790 (0) | O-Glycosyl hydrolases family 17 protein |
| CRO_T002762 | AT1G09580 (4.00E-13) | emp24/gp25L/p24 family/GOLD family protein |
| CRO_T009374 | AT5G21090 (6.00E-17) | Leucine-rich repeat (LRR) family protein |
| CRO_T011766 | AT3G28040 (0) | Leucine-rich receptor-like protein kinase family protein |
| CRO_T012080 | AT3G05220 (2.00E-21) | Heavy metal transport/detoxification superfamily protein |
| CRO_T022733 | AT5G35180 (3.00E-48) | Protein of unknown function (DUF1336) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000201 | chromosome DNA catabolic process, endonucleolytic menaquinone biosynthetic process 1,4-dihydroxy-2-naphthoyl-CoA synthase activity chromosome organization 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) starch biosynthesis Cell cycle - yeast Ubiquinone and other terpenoid-quinone biosynthesis formation of glycosidic bonds, GlycosylTransferases: GTnc glucan endo-1,3-beta-D-glucosidase activity Protein_kinases_phosphatases, PPC:1.9.1: CRPK1 Like Kinase (Types 1 and 2) adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc Peroxisome | details |
| TreatCFM000599 | Fatty acid elongation Transcription_related, Transcription factor: GRF Transcription_related, Transcription factor: Orphans developmental process transferase activity, transferring acyl groups other than amino-acyl groups | details |
| TreatCFM001116 | Protein_kinases_phosphatases, PPC:4.5.4: GSK3/Shaggy Like Protein Kinase Family uridylyltransferase activity ErbB signaling pathway stachyose degradation sucrose biosynthesis II UDP-glucose biosynthesis Pentose and glucuronate interconversions | details |
| TreatCFM001235 | Transcription_related, Transcription factor: BBR-BPC Transcription_related, Transcription factor: GRF baicalein degradation (hydrogen peroxide detoxification) 2-oxoisovalerate decarboxylation to isobutanoyl-CoA Propanoate metabolism oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor Transcription_related, Transcription factor: HB | details |
| TreatCFM001495 | hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc U1 snRNP Other glycan degradation snRNA stem-loop binding alpha-mannosidase activity phosphoprotein binding U1 snRNA binding red or far-red light signaling pathway mannose metabolic process protein deglycosylation mRNA splicing, via spliceosome response to stress carbohydrate binding | details |
Expression profiles
 Show details about module gene expression profiling |