TreatCFM001211's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| protein insertion into membrane | 0.001595745 | GO:0051205 |
| Protein_kinases_phosphatases, PPC:1.7.2: Domain of Unknown Function 26 (DUF26) Kinase | 0.005842855 | kinase family |
| Transcription_related, Transcription regulator: HMG | 0.005842855 | TF family |
| Protein export | 0.008482389 | KEGG pathway |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T000950 | AT4G14570 (0) | AARE|acylamino acid-releasing enzyme |
| CRO_T006792 | AT5G62050 (9.00E-43) | ATOXA1|HOMOLOG OF YEAST OXIDASE ASSEMBLY 1 (OXA1); OXA1AT|HOMOLOG OF YEAST OXIDASE ASSEMBLY 1 (OXA1) IN ARABIDOPSIS THALIANA |
| CRO_T011849 | AT3G51880 (3.00E-14) | HMGB1|high mobility group B1; NFD1|NUCLEOSOME/CHROMATIN ASSEMBLY FACTOR D1 |
| CRO_T013873 | AT4G23130 (6.00E-49) | CRK5|cysteine-rich RLK (RECEPTOR-like protein kinase) 5; RLK6|RECEPTOR-LIKE PROTEIN KINASE 6 |
| CRO_T016999 | - | - |
| CRO_T029986 | AT4G34630 (8.00E-10) | unknown protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000823 | 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity 3-oxo-5-alpha-steroid 4-dehydrogenase activity progesterone 5-alpha-reductase activity sterol 5-alpha reductase activity brassinosteroid biosynthesis I brassinosteroid biosynthesis II Brassinosteroid biosynthesis Transcription_related, Transcription regulator: HMG 3'-phospho-5'-adenylyl sulfate transmembrane transport Plant-pathogen interaction integral component of endoplasmic reticulum membrane integral component of Golgi membrane polysaccharide catabolic process Transcription_related, Transcription factor: B3 | details |
| TreatCFM001525 | anthocyanidin modification (Arabidopsis) anthocyanin biosynthesis anthocyanin biosynthesis (delphinidin 3-O-glucoside) anthocyanin biosynthesis (pelargonidin 3-O-glucoside) cellulose biosynthesis quercetin glucoside biosynthesis (Allium) quercetin gentiotetraside biosynthesis plant-type secondary cell wall biogenesis microtubule cytoskeleton organization cytokinesis response to osmotic stress defense response to fungus cellulose biosynthetic process response to water deprivation defense response to bacterium multicellular organism development formation of glycosidic bonds, GlycosylTransferases: GTnc Protein_kinases_phosphatases, PPC:1.9.2: S Domain Kinase (Type 2) | details |
| TreatCFM001536 | Transcription_related, Transcription factor: ARF | details |
| TreatCFM001643 | maintenance of protein location in nucleus bundle sheath cell fate specification asymmetric cell division radial pattern formation gravitropism leaf development nucleus Transcription_related, Transcription factor: GRAS | details |
| TreatCFM001662 | metalloaminopeptidase activity peptide binding Arachidonic acid metabolism peptide catabolic process shoot system morphogenesis protein retention in Golgi apparatus proteolysis protein phosphatase type 2A regulator activity regulation of protein phosphatase type 2A activity meristem structural organization cell growth retrograde vesicle-mediated transport, Golgi to ER Golgi organization Golgi transport complex protein phosphatase type 2A complex cytosol mRNA surveillance pathway serine-type endopeptidase activity embryo development ending in seed dormancy | details |
Expression profiles
 Show details about module gene expression profiling |