TreatCFM001662's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| metalloaminopeptidase activity | 0.006071349 | GO:0070006 |
| peptide binding | 0.006071349 | GO:0042277 |
| Arachidonic acid metabolism | 0.006378735 | KEGG pathway |
| peptide catabolic process | 0.007361202 | GO:0043171 |
| shoot system morphogenesis | 0.007361202 | GO:0010016 |
| protein retention in Golgi apparatus | 0.007361202 | GO:0045053 |
| proteolysis | 0.007361202 | GO:0006508 |
| protein phosphatase type 2A regulator activity | 0.008091544 | GO:0008601 |
| regulation of protein phosphatase type 2A activity | 0.010791643 | GO:0034047 |
| meristem structural organization | 0.010791643 | GO:0009933 |
| cell growth | 0.012419398 | GO:0016049 |
| retrograde vesicle-mediated transport, Golgi to ER | 0.012419398 | GO:0006890 |
| Golgi organization | 0.012419398 | GO:0007030 |
| Golgi transport complex | 0.014158109 | GO:0017119 |
| protein phosphatase type 2A complex | 0.014158109 | GO:0000159 |
| cytosol | 0.01654079 | GO:0005829 |
| mRNA surveillance pathway | 0.022207137 | KEGG pathway |
| serine-type endopeptidase activity | 0.048248928 | GO:0004252 |
| embryo development ending in seed dormancy | 0.04917941 | GO:0009793 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T000950 | AT4G14570 (0) | AARE|acylamino acid-releasing enzyme |
| CRO_T008709 | AT1G17720 (1.00E-04) | ATB BETA|Protein phosphatase 2A, regulatory subunit PR55 |
| CRO_T018737 | AT2G39370 (3.00E-35) | MAKR4|MEMBRANE-ASSOCIATED KINASE REGULATOR 4 |
| CRO_T026422 | AT5G51430 (0) | EYE|EMBRYO YELLOW |
| CRO_T027627 | AT4G33090 (9.00E-20) | APM1|aminopeptidase M1 |
| CRO_T033231 | AT5G06970 (6.00E-75) | Protein of unknown function (DUF810) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000824 | mRNA surveillance pathway protein phosphatase type 2A complex regulation of protein phosphatase type 2A activity cytochrome b6f complex assembly protein phosphatase type 2A regulator activity isomerase activity intracellular part root development | details |
| TreatCFM000892 | Arachidonic acid metabolism shoot system morphogenesis regulation of microtubule-based process protein localization cytoskeleton-dependent intracellular transport protein retention in Golgi apparatus peptide catabolic process spindle assembly meristem structural organization peptide binding metalloaminopeptidase activity ATP-dependent microtubule motor activity, plus-end-directed nucleotide binding cell growth Golgi organization retrograde vesicle-mediated transport, Golgi to ER Protein_kinases_phosphatases, PPC:1.7.2: Domain of Unknown Function 26 (DUF26) Kinase Golgi transport complex U2-type spliceosomal complex U12-type spliceosomal complex U2 snRNP HAUS complex precatalytic spliceosome kinesin complex cytosol catalytic step 2 spliceosome non-membrane spanning protein tyrosine kinase activity root development microtubule-based movement mRNA splicing, via spliceosome peptidyl-tyrosine phosphorylation | details |
| TreatCFM001211 | protein insertion into membrane Protein_kinases_phosphatases, PPC:1.7.2: Domain of Unknown Function 26 (DUF26) Kinase Transcription_related, Transcription regulator: HMG Protein export | details |
| TreatCFM001536 | Transcription_related, Transcription factor: ARF | details |
| TreatCFM001997 | mRNA surveillance pathway jasmonic acid biosynthesis calcium:proton antiporter activity protein phosphatase type 2A regulator activity protein phosphatase type 2A complex cell plate phragmoplast regulation of protein phosphatase type 2A activity calcium ion transmembrane transport Endocytosis pollen development | details |
| TreatCFM001998 | jasmonic acid biosynthesis formation of glycosidic bonds, GlycosylTransferases: GTnc calcium:proton antiporter activity mRNA surveillance pathway protein phosphatase type 2A regulator activity calcium ion transmembrane transport regulation of protein phosphatase type 2A activity Endocytosis acetylglucosaminyltransferase activity pollen development protein phosphatase type 2A complex cell plate phragmoplast peptidase activity Protein_kinases_phosphatases, PPC:1.12.4: Leucine Rich Repeat Kinase XI & XII integral component of membrane | details |
Expression profiles
 Show details about module gene expression profiling |