TreatCFM001230's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| vindoline and vinblastine biosynthesis | 9.59E-05 | plantCyc |
| xyloglucan biosynthesis | 0.004516602 | plantCyc |
| Cytochrome_P450, Cytochrome P450: CYP71B | 0.009286528 | CYP450 family |
| formation of glycosidic bonds, GlycosylTransferases: GTnc | 0.009286528 | cazy family |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T009152 | AT3G59070 (1.00E-66) | Cytochrome b561/ferric reductase transmembrane with DOMON related domain |
| CRO_T014272 | AT1G13110 (1.00E-95) | CYP71B7|cytochrome P450, family 71 subfamily B, polypeptide 7 |
| CRO_T018832 | AT1G78780 (1.00E-44) | pathogenesis-related family protein |
| CRO_T022100 | AT5G47950 (2.00E-45) | HXXXD-type acyl-transferase family protein |
| CRO_T028052 | AT5G62220 (5.00E-146) | ATGT18|glycosyltransferase 18; XLT2|Xyloglucan L-side chain galactosylTransferase position 2 |
| CRO_T030703 | AT4G17720 (3.00E-91) | RNA-binding (RRM/RBD/RNP motifs) family protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000941 | vindoline and vinblastine biosynthesis oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen monooxygenase activity polyamine transmembrane transport L-amino acid transmembrane transporter activity heme binding iron ion binding polyamine transmembrane transporter activity Cytochrome_P450, Cytochrome P450: CYP71B Transcription_related, Transcription factor: C2C2-GATA Transcription_related, Transcription factor: M-type amino acid transmembrane transport | details |
| TreatCFM001995 | adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 Transcription_related, Transcription regulator: LIM daphnetin modification starch degradation II phosphoglucan, water dikinase activity sesaminol glucoside biosynthesis starch binding nucleotide binding flavonoid biosynthetic process flavonoid glucuronidation | details |
| TreatCFM002094 | lytic vacuole organization inosine catabolic process glycine decarboxylation via glycine cleavage system AP-3 adaptor complex glycine cleavage complex Protein_kinases_phosphatases, PPC:4.2.4: SNF1 Related Protein Kinase (SnRK) inosine nucleosidase activity Golgi to vacuole transport regulation of intracellular pH adenine and adenosine salvage II glycine cleavage guanosine nucleotides degradation I pyrimidine ribonucleosides salvage II pyrimidine salvage pathway adenosine nucleotides degradation I folate transformations II photorespiration transferase activity, transferring alkyl or aryl (other than methyl) groups UDP-glucosyltransferase activity Lysosome Terpenoid backbone biosynthesis | details |
| TreatCFM002147 | adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 starch degradation II Transcription_related, Transcription regulator: LIM phosphoglucan, water dikinase activity starch binding phosphorylation | details |
Expression profiles
 Show details about module gene expression profiling |