TreatCFM002147's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 | 0.001063908 | cazy family |
| starch degradation II | 0.002480253 | plantCyc |
| Transcription_related, Transcription regulator: LIM | 0.002658199 | TF family |
| phosphoglucan, water dikinase activity | 0.005213151 | GO:0051752 |
| starch binding | 0.011723524 | GO:2001070 |
| phosphorylation | 0.044379179 | GO:0016310 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T003885 | AT2G39900 (1.00E-15) | WLIM2a|WLIM2a |
| CRO_T015214 | AT5G26570 (0) | PWD|PHOSPHOGLUCAN WATER DIKINASE |
| CRO_T015268 | - | - |
| CRO_T024026 | AT4G34660 (2.00E-129) | SH3 domain-containing protein |
| CRO_T030039 | AT1G07040 (1.00E-111) | unknown protein |
| CRO_T030703 | AT4G17720 (3.00E-91) | RNA-binding (RRM/RBD/RNP motifs) family protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000941 | vindoline and vinblastine biosynthesis oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen monooxygenase activity polyamine transmembrane transport L-amino acid transmembrane transporter activity heme binding iron ion binding polyamine transmembrane transporter activity Cytochrome_P450, Cytochrome P450: CYP71B Transcription_related, Transcription factor: C2C2-GATA Transcription_related, Transcription factor: M-type amino acid transmembrane transport | details |
| TreatCFM001230 | vindoline and vinblastine biosynthesis xyloglucan biosynthesis Cytochrome_P450, Cytochrome P450: CYP71B formation of glycosidic bonds, GlycosylTransferases: GTnc | details |
| TreatCFM001995 | adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 Transcription_related, Transcription regulator: LIM daphnetin modification starch degradation II phosphoglucan, water dikinase activity sesaminol glucoside biosynthesis starch binding nucleotide binding flavonoid biosynthetic process flavonoid glucuronidation | details |
| TreatCFM002094 | lytic vacuole organization inosine catabolic process glycine decarboxylation via glycine cleavage system AP-3 adaptor complex glycine cleavage complex Protein_kinases_phosphatases, PPC:4.2.4: SNF1 Related Protein Kinase (SnRK) inosine nucleosidase activity Golgi to vacuole transport regulation of intracellular pH adenine and adenosine salvage II glycine cleavage guanosine nucleotides degradation I pyrimidine ribonucleosides salvage II pyrimidine salvage pathway adenosine nucleotides degradation I folate transformations II photorespiration transferase activity, transferring alkyl or aryl (other than methyl) groups UDP-glucosyltransferase activity Lysosome Terpenoid backbone biosynthesis | details |
Expression profiles
 Show details about module gene expression profiling |