TreatCFM001291's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Base excision repair | 0.004248721 | KEGG pathway |
| histone-threonine phosphorylation | 0.006436646 | GO:0035405 |
| histone threonine kinase activity | 0.009029289 | GO:0035184 |
| DNA-(apurinic or apyrimidinic site) lyase activity | 0.01128411 | GO:0003906 |
| hydrolase activity, hydrolyzing N-glycosyl compounds | 0.015039922 | GO:0016799 |
| cell differentiation | 0.030535686 | GO:0030154 |
| Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII | 0.04161083 | kinase family |
| Transcription_related, Transcription factor: C2H2 | 0.04161083 | TF family |
| Transcription_related, Transcription factor: GRAS | 0.04161083 | TF family |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T000340 | AT1G14920 (4.00E-26) | GAI|GIBBERELLIC ACID INSENSITIVE; RGA2|RESTORATION ON GROWTH ON AMMONIA 2 |
| CRO_T000733 | AT1G50280 (6.00E-66) | Phototropic-responsive NPH3 family protein |
| CRO_T009203 | AT1G24625 (8.00E-27) | ZFP7|zinc finger protein 7 |
| CRO_T011968 | AT1G52500 (3.00E-36) | ATFPG-1|A. THALIANA FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASE 1; ATFPG-2|FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASE 2; ATMMH-1|MUTM homolog-1; FPG-1|FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASE 1; MMH|MUTM homolog |
| CRO_T016828 | AT1G09450 (4.00E-138) | Haspin|Haspin-related gene |
| CRO_T019546 | AT5G01020 (0) | Protein kinase superfamily protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM001763 | Base excision repair histone-threonine phosphorylation stem cell division regulation of post-embryonic root development virus induced gene silencing regulation of ethylene biosynthetic process posttranscriptional gene silencing by RNA protein binding, bridging oxidized purine nucleobase lesion DNA N-glycosylase activity histone threonine kinase activity nucleotide-excision repair cellular response to phosphate starvation Ubiquitin_Proteasome_system, SOCS/VHL/BC-box: 3-box base-excision repair cell differentiation damaged DNA binding Transcription_related, Transcription factor: C2H2 Transcription_related, Transcription factor: GRAS Ubiquitin_Proteasome_system, E3 adaptor: BTB proteasome-mediated ubiquitin-dependent protein catabolic process | details |
| TreatCFM001764 | histone threonine kinase activity stem cell division histone-threonine phosphorylation regulation of post-embryonic root development virus induced gene silencing regulation of ethylene biosynthetic process posttranscriptional gene silencing by RNA protein binding, bridging adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 Protein_kinases_phosphatases, PPC:1.10.1: Receptor Like Cytoplasmic Kinase VI Protein_kinases_phosphatases, PPC:1.14.2: Receptor Like Cytoplasmic Kinase IX Ubiquitin_Proteasome_system, SOCS/VHL/BC-box: 3-box cellular response to phosphate starvation protein phosphorylation Ubiquitin_Proteasome_system, E3 adaptor: BTB response to stress proteasome-mediated ubiquitin-dependent protein catabolic process intracellular signal transduction | details |
Expression profiles
 Show details about module gene expression profiling |