TreatCFM001303's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| L-carnitine biosynthesis | 4.72E-07 | plantCyc |
| zeaxanthin, antheraxanthin and violaxanthin interconversion | 0.001329591 | plantCyc |
| lipase activity | 0.007971652 | GO:0016298 |
| hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc | 0.008306286 | cazy family |
| polygalacturonase activity | 0.008492422 | GO:0004650 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T004201 | - | - |
| CRO_T010278 | AT5G14980 (1.00E-117) | alpha/beta-Hydrolases superfamily protein |
| CRO_T011027 | AT2G21530 (2.00E-32) | SMAD/FHA domain-containing protein |
| CRO_T011211 | AT3G42950 (0) | Pectin lyase-like superfamily protein |
| CRO_T015749 | AT3G53490 (1.00E-36) | unknown protein |
| CRO_T015750 | AT3G53490 (4.00E-10) | unknown protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000838 | Cytochrome_P450, Cytochrome P450: CYP77B L-carnitine biosynthesis vernolate biosynthesis I Transcription_related, Transcription factor: GRF Transcription_related, Transcription factor: SBP poly-hydroxy fatty acids biosynthesis long-chain-alcohol O-fatty-acyltransferase activity diacylglycerol O-acyltransferase activity triglyceride biosynthetic process diacylglycerol and triacylglycerol biosynthesis integral component of membrane plasma membrane secondary metabolite biosynthetic process response to stress | details |
| TreatCFM001887 | nickel cation binding UDP-glucose 4-epimerase activity UDP-L-arabinose biosynthesis I (from UDP-xylose) zeaxanthin, antheraxanthin and violaxanthin interconversion UDP-sugars interconversion Cell cycle - yeast galactose metabolic process nitrogen compound metabolic process Amino sugar and nucleotide sugar metabolism chloroplast thylakoid membrane cellular process | details |
| TreatCFM002145 | zeaxanthin, antheraxanthin and violaxanthin interconversion starch degradation II phosphorylated carbohydrate dephosphorylation alpha-amylase activity sugar-phosphatase activity hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc starch catabolic process starch binding protein tyrosine/serine/threonine phosphatase activity Transcription_related, Transcription factor: NAC chloroplast | details |
Expression profiles
 Show details about module gene expression profiling |