TreatCFM000838's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Cytochrome_P450, Cytochrome P450: CYP77B | 0.002275481 | CYP450 family |
| L-carnitine biosynthesis | 0.003447087 | plantCyc |
| vernolate biosynthesis I | 0.003447087 | plantCyc |
| Transcription_related, Transcription factor: GRF | 0.003980327 | TF family |
| Transcription_related, Transcription factor: SBP | 0.005682149 | TF family |
| poly-hydroxy fatty acids biosynthesis | 0.007462731 | plantCyc |
| long-chain-alcohol O-fatty-acyltransferase activity | 0.011799994 | GO:0047196 |
| diacylglycerol O-acyltransferase activity | 0.011799994 | GO:0004144 |
| triglyceride biosynthetic process | 0.017226269 | GO:0019432 |
| diacylglycerol and triacylglycerol biosynthesis | 0.020602007 | plantCyc |
| integral component of membrane | 0.021566533 | GO:0016021 |
| plasma membrane | 0.021566533 | GO:0005886 |
| secondary metabolite biosynthetic process | 0.04621916 | GO:0044550 |
| response to stress | 0.04621916 | GO:0006950 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T007886 | AT2G47710 (2.00E-23) | Adenine nucleotide alpha hydrolases-like superfamily protein |
| CRO_T008078 | AT1G27370 (1.00E-30) | SPL10|squamosa promoter binding protein-like 10 |
| CRO_T012531 | AT2G22840 (6.00E-30) | AtGRF1|growth-regulating factor 1 |
| CRO_T014794 | AT1G11600 (0) | CYP77B1|cytochrome P450, family 77, subfamily B, polypeptide 1 |
| CRO_T015749 | AT3G53490 (1.00E-36) | unknown protein |
| CRO_T021676 | AT2G42840 (6.00E-23) | PDF1|protodermal factor 1 |
| CRO_T030200 | AT5G53390 (2.00E-20) | FOP1|FOLDED PETAL 1; WSD11|NTHASE/DIACYLGLYCEROL ACYLTRANSFERASE 11 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM001235 | Transcription_related, Transcription factor: BBR-BPC Transcription_related, Transcription factor: GRF baicalein degradation (hydrogen peroxide detoxification) 2-oxoisovalerate decarboxylation to isobutanoyl-CoA Propanoate metabolism oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor Transcription_related, Transcription factor: HB | details |
| TreatCFM001303 | L-carnitine biosynthesis zeaxanthin, antheraxanthin and violaxanthin interconversion lipase activity hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc polygalacturonase activity | details |
| TreatCFM001345 | Propanoate metabolism phosphatidylinositol-3-phosphate binding phosphatidylinositol-3,5-bisphosphate binding oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor nucleophagy protein localization to pre-autophagosomal structure mitophagy protein lipidation 2-oxoisovalerate decarboxylation to isobutanoyl-CoA Transcription_related, Transcription factor: GRF formation of glycosidic bonds, GlycosylTransferases: GTnc pre-autophagosomal structure membrane extrinsic component of membrane | details |
| TreatCFM001503 | retrograde protein transport, ER to cytosol Transcription_related, Transcription factor: GRF endoplasmic reticulum lumen ER-associated ubiquitin-dependent protein catabolic process formation of glycosidic bonds, GlycosylTransferases: GTnc response to salt stress lipid binding Transcription_related, Transcription factor: HB Protein processing in endoplasmic reticulum sequence-specific DNA binding | details |
Expression profiles
 Show details about module gene expression profiling |