TreatCFM001340's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Prp19 complex | 0.007075603 | GO:0000974 |
| acetyl-CoA carboxylase complex | 0.007075603 | GO:0009317 |
| prespliceosome | 0.007075603 | GO:0071010 |
| catalytic step 1 spliceosome | 0.007075603 | GO:0071012 |
| post-mRNA release spliceosomal complex | 0.007075603 | GO:0071014 |
| leucine catabolic process | 0.008863283 | GO:0006552 |
| fatty acid biosynthesis initiation I | 0.010409367 | plantCyc |
| gibberellin biosynthesis I (non C-3, non C-13 hydroxylation) | 0.010409367 | plantCyc |
| gibberellin biosynthesis III (early C-13 hydroxylation) | 0.010409367 | plantCyc |
| octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) | 0.010409367 | plantCyc |
| scopoletin biosynthesis | 0.010409367 | plantCyc |
| umbelliferone biosynthesis | 0.010409367 | plantCyc |
| catalytic step 2 spliceosome | 0.017126384 | GO:0071013 |
| acetyl-CoA carboxylase activity | 0.029929142 | GO:0003989 |
| iron-sulfur cluster binding | 0.029929142 | GO:0051536 |
| mRNA splicing, via spliceosome | 0.032842763 | GO:0000398 |
| fatty acid biosynthetic process | 0.032842763 | GO:0006633 |
| oxidation-reduction process | 0.039363527 | GO:0055114 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T000409 | AT2G43400 (1.00E-136) | ETFQO|electron-transfer flavoprotein:ubiquinone oxidoreductase |
| CRO_T013444 | AT2G38040 (0) | CAC3|acetyl Co-enzyme a carboxylase carboxyltransferase alpha subunit |
| CRO_T025634 | AT5G25540 (2.00E-22) | CID6|CTC-interacting domain 6 |
| CRO_T028512 | AT1G27850 (2.00E-48) | unknown protein |
| CRO_T029827 | AT1G17010 (1.00E-21) | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
| CRO_T032170 | AT2G16860 (1.00E-117) | GCIP-interacting family protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000062 | Transcription_related, Transcription factor: PLATZ HAUS complex acetyl-CoA carboxylase complex spindle assembly fatty acid biosynthesis initiation I octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) acetyl-CoA carboxylase activity fatty acid biosynthetic process Carbon metabolism | details |
| TreatCFM000452 | fatty acid biosynthesis initiation I octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) acetyl-CoA carboxylase activity acetyl-CoA carboxylase complex fatty acid biosynthetic process Carbon metabolism | details |
| TreatCFM000641 | Ubiquitin_Proteasome_system, E3 adaptor: DWD acetyl-CoA carboxylase complex HAUS complex ureidoglycolate hydrolase activity spindle assembly fatty acid biosynthesis initiation I octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) acetyl-CoA carboxylase activity fatty acid biosynthetic process | details |
| TreatCFM001039 | regulation of phagocytosis inositol lipid-mediated signaling phosphatidic acid biosynthetic process regulation of cell migration phospholipase D activity cellular lipid metabolic process Glycerophospholipid metabolism choline biosynthesis III phosphatidate metabolism, as a signaling molecule phospholipases | details |
| TreatCFM001148 | Carbon metabolism fatty acid biosynthesis initiation I L-cysteine biosynthesis I octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) acetyl-CoA carboxylase activity cysteine synthase activity transferase activity U2-type spliceosomal complex U12-type spliceosomal complex acetyl-CoA carboxylase complex vacuolar proton-transporting V-type ATPase, V0 domain U2 snRNP precatalytic spliceosome cysteine biosynthetic process from serine vacuolar acidification ATP hydrolysis coupled proton transport cellular amino acid biosynthetic process catalytic step 2 spliceosome mRNA splicing, via spliceosome proton-transporting ATPase activity, rotational mechanism fatty acid biosynthetic process formation of glycosidic bonds, GlycosylTransferases: GTnc | details |
| TreatCFM001460 | sugar-phosphatase activity riboflavin kinase activity Hsp90 protein binding 1-phosphatidylinositol-4-phosphate 5-kinase activity microtubule minus-end binding HAUS complex spindle microtubule Inositol phosphate metabolism 3-phosphoinositide biosynthesis D-myo-inositol (1,4,5)-trisphosphate biosynthesis spindle assembly phosphatidylinositol phosphorylation dephosphorylation | details |
| TreatCFM002013 | mitochondrial inner membrane presequence translocase complex integral component of mitochondrial inner membrane acetyl-CoA carboxylase complex Ubiquitin_Proteasome_system, DUB: USP fatty acid biosynthesis initiation I octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) protein import into chloroplast stroma protein import into mitochondrial matrix protein channel activity acetyl-CoA carboxylase activity single-organism process fatty acid biosynthetic process Carbon metabolism | details |
Expression profiles
 Show details about module gene expression profiling |