TreatCFM001368's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Protein_kinases_phosphatases, PPC:4.5.6: LAMMER Kinase Family | 0.002127502 | kinase family |
| L-methionine salvage cycle II (plants) | 0.004785112 | plantCyc |
| ethylene biosynthesis I (plants) | 0.005577683 | plantCyc |
| mitochondrial inner membrane presequence translocase complex | 0.008772705 | GO:0005744 |
| Transcription_related, Transcription factor: C3H | 0.013515812 | TF family |
| protein import into mitochondrial matrix | 0.015493564 | GO:0030150 |
| mRNA processing | 0.015493564 | GO:0006397 |
| protein autophosphorylation | 0.01803847 | GO:0046777 |
| biosynthetic process | 0.01803847 | GO:0009058 |
| protein serine/threonine/tyrosine kinase activity | 0.023125572 | GO:0004712 |
| transaminase activity | 0.036580334 | GO:0008483 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T000518 | AT3G55510 (2.00E-123) | RBL|REBELOTE |
| CRO_T005527 | AT3G53570 (0) | AFC1|FUS3-complementing gene 1 |
| CRO_T013906 | - | - |
| CRO_T021915 | AT5G51130 (3.00E-77) | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
| CRO_T022554 | AT5G36160 (7.00E-15) | Tyrosine transaminase family protein |
| CRO_T023672 | AT1G55900 (3.00E-93) | EMB1860|embryo defective 1860 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM001369 | regulation of cellular metabolic process cullin deneddylation positive regulation of G2/M transition of mitotic cell cycle carbohydrate metabolic process Transcription_related, Transcription factor: C3H glyoxylate cycle TCA cycle II (plants and fungi) malate metabolic process phosphotransferase activity, alcohol group as acceptor L-malate dehydrogenase activity Sec61 translocon complex gluconeogenesis I tricarboxylic acid cycle COP9 signalosome Protein export proteasome complex | details |
| TreatCFM001370 | gluconeogenesis I lipid binding Transcription_related, Transcription factor: NF-YA D-myo-inositol (1,4,5)-trisphosphate degradation flavin biosynthesis I (bacteria and plants) GTP cyclohydrolase II activity 3,4-dihydroxy-2-butanone-4-phosphate synthase activity Riboflavin metabolism malate dehydrogenase (decarboxylating) (NAD+) activity malate metabolic process riboflavin biosynthetic process phosphatidylinositol dephosphorylation microtubule cytoskeleton cytoskeletal part | details |
Expression profiles
 Show details about module gene expression profiling |