TreatCFM001386's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| RNA polymerase III core binding | 0.009445018 | GO:0000994 |
| transcription factor TFIIIB complex assembly | 0.011550752 | GO:0070217 |
| protein transmembrane transport | 0.011550752 | GO:0071806 |
| protein localization to organelle | 0.011550752 | GO:0033365 |
| negative regulation of transcription from RNA polymerase III promoter | 0.011550752 | GO:0016480 |
| protein channel activity | 0.014157482 | GO:0015266 |
| sugar transmembrane transporter activity | 0.01473039 | GO:0051119 |
| oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 0.01473039 | GO:0016671 |
| protein disulfide oxidoreductase activity | 0.023048169 | GO:0015035 |
| glycerol ether metabolic process | 0.027692326 | GO:0006662 |
| sulfate assimilation | 0.028551191 | GO:0000103 |
| cellular response to oxidative stress | 0.028551191 | GO:0034599 |
| carbohydrate transport | 0.02977338 | GO:0008643 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T000859 | AT5G07490 (4.00E-13) | unknown protein |
| CRO_T018794 | AT5G06430 (1.00E-55) | Thioredoxin superfamily protein |
| CRO_T021390 | AT3G25120 (4.00E-39) | Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein |
| CRO_T024450 | AT5G13170 (2.00E-74) | SAG29|senescence-associated gene 29 |
| CRO_T026977 | AT1G19680 (1.00E-07) | RING/U-box superfamily protein |
| CRO_T029932 | AT3G08970 (9.00E-14) | TMS1|THERMOSENSITIVE MALE STERILE 1 |
| CRO_T031953 | AT5G13240 (2.00E-52) | transcription regulators |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM001322 | protein localization to organelle protein transmembrane transport ribonucleoside binding protein channel activity GTPase activator activity DNA-directed RNA polymerase activity | details |
| TreatCFM001385 | sulfoquinovosyl diacylglycerol biosynthesis formation of glycosidic bonds, GlycosylTransferases: GTnc RNA polymerase III core binding transcription factor TFIIIB complex assembly negative regulation of transcription from RNA polymerase III promoter vacuolar acidification proton-transporting ATPase activity, rotational mechanism ATP hydrolysis coupled proton transport MAPK signaling pathway Glycerolipid metabolism vacuolar proton-transporting V-type ATPase, V0 domain | details |
| TreatCFM001669 | Protein_kinases_phosphatases, PPC:4.1.5.1: WNK like kinase - with no lysine kinase mevalonate pathway I Carbon metabolism protein transmembrane transport protein localization to organelle cysteine biosynthetic process from serine acetyl-CoA C-acetyltransferase activity cysteine synthase activity protein channel activity cellular amino acid biosynthetic process Plant-pathogen interaction RNA degradation | details |
| TreatCFM001834 | snRNA transcription protein transmembrane transport protein localization to organelle protein channel activity GTPase activator activity Endocytosis peptidase activity positive regulation of GTPase activity pollen development embryo development ending in seed dormancy | details |
| TreatCFM001967 | protein transmembrane transport protein localization to organelle snRNA transcription Base excision repair DNA-3-methyladenine glycosylase activity protein channel activity base-excision repair isoflavonoid biosynthesis II benzoate biosynthesis I (CoA-dependent, β-oxidative) peptidase activity | details |
| TreatCFM001987 | protein transmembrane transport protein localization to organelle cysteine biosynthetic process from serine cellular amino acid biosynthetic process protein channel activity cysteine synthase activity positive regulation of GTPase activity pollen development MAPK signaling pathway GTPase activator activity embryo development ending in seed dormancy Endocytosis RNA degradation | details |
| TreatCFM002000 | snRNA transcription tubulin complex assembly protein transmembrane transport post-chaperonin tubulin folding pathway protein localization to organelle beta-tubulin binding microtubule cytoskeleton organization protein channel activity GTPase activator activity positive regulation of GTPase activity peptidase activity | details |
Expression profiles
 Show details about module gene expression profiling |