TreatCFM001578's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| carboxypeptidase activity | 0.005581806 | GO:0004180 |
| maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 0.020423122 | GO:0000462 |
| protein binding | 0.020976835 | GO:0005515 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T003051 | AT5G66090 (7.00E-63) | unknown protein |
| CRO_T011885 | AT5G17840 (1.00E-28) | DnaJ/Hsp40 cysteine-rich domain superfamily protein |
| CRO_T014833 | AT2G43650 (1.00E-89) | EMB2777|EMBRYO DEFECTIVE 2777 |
| CRO_T022978 | - | - |
| CRO_T024035 | - | - |
| CRO_T024115 | AT5G38060 (1.00E-32) | unknown protein |
| CRO_T026948 | - | - |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000204 | starch biosynthesis glucose-1-phosphate adenylyltransferase activity dimethylallyltranstransferase activity glycogen biosynthetic process starch biosynthetic process isoprenoid biosynthetic process maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) chloroplast Terpenoid backbone biosynthesis small-subunit processome Starch and sucrose metabolism nucleolus | details |
| TreatCFM001277 | oxidoreductase activity, acting on NAD(P)H 3'-5' exonuclease activity DNA-directed DNA polymerase activity DNA biosynthetic process nucleic acid phosphodiester bond hydrolysis DNA replication Oxidative phosphorylation | details |
| TreatCFM001596 | chlorophyll cycle chlorophyll synthetase activity Porphyrin and chlorophyll metabolism chlorophyll biosynthetic process clathrin vesicle coat vesicle-mediated transport transferase activity, transferring glycosyl groups | details |
| TreatCFM001793 | U6 snRNA 3'-end processing 3'-5'-exoribonuclease activity mRNA processing RNA splicing RNA phosphodiester bond hydrolysis, exonucleolytic protein binding | details |
Expression profiles
 Show details about module gene expression profiling |