TreatCFM001707's detailed annotation
|
Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| DNA replication origin binding | 0.004431642 | GO:0003688 |
| transcription corepressor activity | 0.004431642 | GO:0003714 |
| Cell cycle | 0.007072836 | KEGG pathway |
| Golgi organization | 0.00983791 | GO:0007030 |
| DNA replication initiation | 0.00983791 | GO:0006270 |
| intra-Golgi vesicle-mediated transport | 0.00983791 | GO:0006891 |
| nuclear origin of replication recognition complex | 0.010424761 | GO:0005664 |
| Golgi transport complex | 0.018229857 | GO:0017119 |
| protein transport | 0.018405243 | GO:0015031 |
| protein transporter activity | 0.025029281 | GO:0008565 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T001448 | AT4G24840 (2.00E-147) | unknown protein |
| CRO_T004167 | AT5G24690 (2.00E-12) | Protein of unknown function (DUF3411) |
| CRO_T014690 | AT3G03570 (0) | Protein of unknown function (DUF3550/UPF0682) |
| CRO_T015241 | AT2G40400 (6.00E-51) | Protein of unknown function (DUF399 and DUF3411) |
| CRO_T017188 | AT2G01120 (2.00E-123) | ATORC4|ORIGIN RECOGNITION COMPLEX SUBUNIT 4 |
| CRO_T030944 | AT4G01990 (2.00E-69) | Tetratricopeptide repeat (TPR)-like superfamily protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000735 | Antigen processing and presentation Transcription_related, Transcription factor: NF-YB asparagine biosynthetic process glutamine metabolic process asparagine synthase (glutamine-hydrolyzing) activity | details |
| TreatCFM001231 | Influenza A Transcription_related, Transcription factor: RWP-RK tRNA wobble position uridine thiolation sulfurtransferase activity L-alanine biosynthesis III transcription corepressor activity molybdenum cofactor biosynthesis zinc II ion transmembrane transport zinc ion transmembrane transporter activity methyltransferase activity | details |
| TreatCFM001725 | Influenza A tRNA wobble position uridine thiolation sulfurtransferase activity L-alanine biosynthesis III transcription corepressor activity molybdenum cofactor biosynthesis small GTPase mediated signal transduction methyltransferase activity | details |
| TreatCFM001986 | L-alanine biosynthesis III molybdenum cofactor biosynthesis tRNA wobble position uridine thiolation chromosome condensation protein targeting to chloroplast Cell cycle - yeast Fanconi anemia pathway sulfurtransferase activity hydrolase activity, acting on acid anhydrides condensed chromosome mitotic nuclear division zinc II ion transmembrane transport | details |
| TreatCFM002010 | Transcription_related, Transcription factor: ERF | details |
| TreatCFM002080 | chromosome condensation condensed chromosome mitotic nuclear division Cell cycle - yeast Fanconi anemia pathway Transcription_related, Transcription factor: HB cytoplasmic part | details |
Expression profiles
 Show details about module gene expression profiling |