TreatCFM000735's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Antigen processing and presentation | 0.005984652 | KEGG pathway |
| Transcription_related, Transcription factor: NF-YB | 0.013640786 | TF family |
| asparagine biosynthetic process | 0.013783459 | GO:0006529 |
| glutamine metabolic process | 0.015492649 | GO:0006541 |
| asparagine synthase (glutamine-hydrolyzing) activity | 0.018883339 | GO:0004066 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T002761 | AT3G22850 (1.00E-106) | Aluminium induced protein with YGL and LRDR motifs |
| CRO_T004118 | AT1G01660 (2.00E-13) | RING/U-box superfamily protein |
| CRO_T004556 | AT3G06780 (4.00E-05) | glycine-rich protein |
| CRO_T006181 | AT2G13570 (2.00E-45) | NF-YB7|nuclear factor Y, subunit B7 |
| CRO_T012634 | AT2G01340 (1.00E-28) | At17.1|Encodes a protein whose expression is responsive to nematode infection. |
| CRO_T027861 | - | - |
| CRO_T030944 | AT4G01990 (2.00E-69) | Tetratricopeptide repeat (TPR)-like superfamily protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000185 | auxin biosynthetic process negative regulation of ethylene biosynthetic process lagging strand elongation copper ion export DNA ligation involved in DNA repair response to water shade avoidance negative regulation of indoleacetic acid biosynthetic process via tryptophan copper ion transport protein ADP-ribosylation regulation of transcription, DNA-templated | details |
| TreatCFM000497 | DNA 5'-adenosine monophosphate hydrolase activity Ubiquitin_Proteasome_system, E3: RING RNA transport nucleic acid phosphodiester bond hydrolysis DNA repair protein ubiquitination | details |
| TreatCFM001231 | Influenza A Transcription_related, Transcription factor: RWP-RK tRNA wobble position uridine thiolation sulfurtransferase activity L-alanine biosynthesis III transcription corepressor activity molybdenum cofactor biosynthesis zinc II ion transmembrane transport zinc ion transmembrane transporter activity methyltransferase activity | details |
| TreatCFM001353 | protein import into nucleus, docking nuclear pore organization intracellular organelle part nuclear pore inner ring protein complex Transcription_related, Transcription factor: E2F-DP Transcription_related, Transcription factor: NF-YB Antigen processing and presentation Cell cycle structural constituent of nuclear pore protein heterodimerization activity | details |
| TreatCFM001707 | DNA replication origin binding transcription corepressor activity Cell cycle Golgi organization DNA replication initiation intra-Golgi vesicle-mediated transport nuclear origin of replication recognition complex Golgi transport complex protein transport protein transporter activity | details |
| TreatCFM001725 | Influenza A tRNA wobble position uridine thiolation sulfurtransferase activity L-alanine biosynthesis III transcription corepressor activity molybdenum cofactor biosynthesis small GTPase mediated signal transduction methyltransferase activity | details |
| TreatCFM001972 | formation of glycosidic bonds, GlycosylTransferases: GTnc deadenylation-dependent decapping of nuclear-transcribed mRNA cytoplasmic mRNA processing body assembly Other types of O-glycan biosynthesis RNA degradation cytoplasmic mRNA processing body cell wall organization | details |
| TreatCFM001986 | L-alanine biosynthesis III molybdenum cofactor biosynthesis tRNA wobble position uridine thiolation chromosome condensation protein targeting to chloroplast Cell cycle - yeast Fanconi anemia pathway sulfurtransferase activity hydrolase activity, acting on acid anhydrides condensed chromosome mitotic nuclear division zinc II ion transmembrane transport | details |
| TreatCFM002010 | Transcription_related, Transcription factor: ERF | details |
| TreatCFM002080 | chromosome condensation condensed chromosome mitotic nuclear division Cell cycle - yeast Fanconi anemia pathway Transcription_related, Transcription factor: HB cytoplasmic part | details |
Expression profiles
 Show details about module gene expression profiling |