TreatCFM001848's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc | 0.003722304 | cazy family |
| cytoplasmic microtubule organization | 0.012667941 | GO:0031122 |
| Galactose metabolism | 0.017514326 | KEGG pathway |
| Ubiquitin_Proteasome_system, E3: U-box | 0.028501468 | ubs family |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T010845 | AT3G29180 (5.00E-116) | Protein of unknown function (DUF1336) |
| CRO_T012853 | AT1G64110 (0) | DAA1|DUO1-activated ATPase 1 |
| CRO_T019383 | - | - |
| CRO_T020329 | AT3G13790 (0) | ATCWINV1|CELL WALL INVERTASE 1 |
| CRO_T020543 | AT2G42810 (1.00E-12) | AtPP5|protein phosphatase 5; PAPP5|Phytochrome-Associated Protein Phosphatase 5; PP5.2|protein phosphatase 5.2 |
| CRO_T029497 | AT3G11230 (3.00E-53) | Yippee family putative zinc-binding protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000687 | bisbenzylisoquinoline alkaloid biosynthesis magnoflorine biosynthesis nuclear outer membrane-endoplasmic reticulum membrane network AP-3 adaptor complex detoxification of copper ion copper ion export hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc | details |
| TreatCFM001117 | phosphatidylethanolamine biosynthesis I superpathway of phospholipid biosynthesis II (plants) long-chain fatty acid biosynthetic process response to molecule of fungal origin phosphatidylserine biosynthetic process tRNA threonylcarbamoyladenosine modification EKC/KEOPS complex AP-3 adaptor complex cytoplasmic microtubule organization sphingosine N-acyltransferase activity Ubiquitin_Proteasome_system, E3: U-box Glycerophospholipid metabolism Lysosome microtubule-severing ATPase activity | details |
| TreatCFM001244 | organic cyclic compound metabolic process long-chain fatty acid biosynthetic process small molecule metabolic process response to molecule of fungal origin phosphatidylserine biosynthetic process phosphatidylethanolamine biosynthesis I superpathway of phospholipid biosynthesis II (plants) heterocycle metabolic process sphingosine N-acyltransferase activity tocopherol cyclase activity vitamin E biosynthesis (tocopherols) cellular lipid metabolic process Ubiquitin_Proteasome_system, E3: U-box MAPK signaling pathway Ubiquinone and other terpenoid-quinone biosynthesis Glycerophospholipid metabolism chloroplast part | details |
| TreatCFM001356 | xylogalacturonan biosynthesis actin cytoskeleton organization Galactose metabolism hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc Transcription_related, Transcription regulator: SWI/SNF-BAF60b formation of glycosidic bonds, GlycosylTransferases: GTnc cytoskeleton structural constituent of cytoskeleton | details |
| TreatCFM001603 | hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc Protein_kinases_phosphatases, PPC:1.Other: Other Protein Kinase secologanin and strictosidine biosynthesis receptor-mediated endocytosis scavenger receptor activity protein tyrosine kinase activity sinapyl alcohol dehydrogenase activity abscisic acid binding cinnamyl-alcohol dehydrogenase activity transmembrane transporter activity Galactose metabolism | details |
| TreatCFM001610 | Galactose metabolism hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc UDP-D-galactose biosynthesis D-galactose degradation III stachyose degradation UDP-sugars interconversion sinapyl alcohol dehydrogenase activity UDP-glucose 4-epimerase activity cinnamyl-alcohol dehydrogenase activity galactose metabolic process secologanin and strictosidine biosynthesis Phenylpropanoid biosynthesis antiporter activity drug transmembrane transporter activity drug transmembrane transport | details |
| TreatCFM001701 | translational frameshifting positive regulation of translational elongation positive regulation of translational termination hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc Transcription_related, Transcription regulator: SWI/SNF-BAF60b Fructose and mannose metabolism Galactose metabolism mannan catabolic process translational initiation ribosome binding mannan endo-1,4-beta-mannosidase activity translation elongation factor activity protein dephosphorylation protein serine/threonine phosphatase activity | details |
| TreatCFM001737 | phosphatidyltransferase activity diacylglycerol cholinephosphotransferase activity ethanolaminephosphotransferase activity signaling receptor activity calcium ion binding phosphatidylethanolamine biosynthetic process Golgi apparatus nuclear outer membrane-endoplasmic reticulum membrane network protein histidine kinase activity diacylglycerol biosynthesis (PUFA enrichment in oilseed) phosphatidylcholine biosynthesis I phosphatidylcholine biosynthesis II phosphatidylethanolamine biosynthesis II integral component of membrane choline biosynthesis III formation of glycosidic bonds, GlycosylTransferases: GTnc phosphorelay signal transduction system membrane part Glycerophospholipid metabolism MAPK signaling pathway - plant | details |
| TreatCFM001747 | Ubiquitin_Proteasome_system, E3: RING peptidyl-proline hydroxylation to 4-hydroxy-L-proline Arginine and proline metabolism nucleic acid binding procollagen-proline 4-dioxygenase activity RNA secondary structure unwinding L-ascorbic acid binding membrane endoplasmic reticulum membrane | details |
Expression profiles
 Show details about module gene expression profiling |