TreatCFM001959's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc | 0.000709167 | cazy family |
| polyprenyltransferase activity | 0.001950499 | GO:0002094 |
| integral component of mitochondrial inner membrane | 0.004253747 | GO:0031305 |
| Glycosaminoglycan degradation | 0.006378735 | KEGG pathway |
| ubiquinone biosynthetic process | 0.006824224 | GO:0006744 |
| isoprenoid biosynthetic process | 0.009253238 | GO:0008299 |
| Ubiquinone and other terpenoid-quinone biosynthesis | 0.009286528 | KEGG pathway |
| peptidase activity | 0.031065353 | GO:0008233 |
| transporter activity | 0.038351981 | GO:0005215 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T007447 | AT1G16650 (2.00E-38) | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
| CRO_T008784 | AT5G13690 (7.00E-64) | CYL1|CYCLOPS 1; NAGLU|N-ACETYL-GLUCOSAMINIDASE |
| CRO_T012344 | AT3G27110 (1.00E-74) | Peptidase family M48 family protein |
| CRO_T012738 | AT1G01630 (3.00E-20) | Sec14p-like phosphatidylinositol transfer family protein |
| CRO_T013027 | AT4G23660 (3.00E-90) | AtPPT1|polyprenyltransferase 1 |
| CRO_T014000 | AT5G56550 (1.00E-08) | ATOXS3|OXIDATIVE STRESS 3 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000916 | hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc Transcription_related, Transcription factor: zf-HD 2-phytyl-1,4-naphthoquinone methyltransferase activity cation transport regulation of sequestering of zinc ion response to zinc ion phylloquinone biosynthetic process ceramide degradation phylloquinol biosynthesis Glycosaminoglycan degradation Sphingolipid metabolism Ubiquinone and other terpenoid-quinone biosynthesis zinc ion transmembrane transporter activity gluconeogenesis I glycolysis I (from glucose 6-phosphate) glycolysis IV (plant cytosol) Rubisco shunt S-adenosylmethionine-dependent methyltransferase activity | details |
| TreatCFM001522 | Base excision repair DNA ligation involved in DNA repair protein ADP-ribosylation lagging strand elongation anion transmembrane transport DNA ligase (ATP) activity inorganic phosphate transmembrane transporter activity NAD+ ADP-ribosyltransferase activity response to stimulus | details |
| TreatCFM001960 | polyprenyltransferase activity 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity ribonuclease inhibitor activity oxaloacetate decarboxylase activity integral component of mitochondrial inner membrane Ubiquinone and other terpenoid-quinone biosynthesis regulation of RNA metabolic process ubiquinone biosynthetic process isoprenoid biosynthetic process negative regulation of catalytic activity | details |
| TreatCFM001975 | hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc Glycosaminoglycan degradation geraniol kinase activity organic cyclic compound metabolic process long-chain fatty acid biosynthetic process CTP:2-trans,-6-trans-farnesol kinase activity response to molecule of fungal origin geranylgeraniol kinase activity small molecule metabolic process tocopherol cyclase activity farnesol metabolic process adenyl-nucleotide exchange factor activity sphingosine N-acyltransferase activity heterocycle metabolic process carpel development cellular lipid metabolic process Sphingolipid metabolism ceramide degradation farnesylcysteine salvage pathway vitamin E biosynthesis (tocopherols) chaperone binding Ubiquinone and other terpenoid-quinone biosynthesis Terpenoid backbone biosynthesis gluconeogenesis I glycolysis I (from glucose 6-phosphate) glycolysis IV (plant cytosol) Rubisco shunt isomerase activity nucleotidyltransferase activity regulation of catalytic activity | details |
Expression profiles
 Show details about module gene expression profiling |