TreatCFM001970's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| UDP-galactose transmembrane transporter activity | 0.002024232 | GO:0005459 |
| UDP-glucose transmembrane transporter activity | 0.002024232 | GO:0005460 |
| 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase activity | 0.002024232 | GO:0046538 |
| UDP-glucose transport | 0.004513644 | GO:0015786 |
| root hair cell development | 0.004513644 | GO:0080147 |
| lateral root development | 0.004513644 | GO:0048527 |
| regulation of pentose-phosphate shunt | 0.004513644 | GO:0043456 |
| UDP-galactose transmembrane transport | 0.004513644 | GO:0072334 |
| gluconeogenesis | 0.007519961 | GO:0006094 |
| glycolysis I (from glucose 6-phosphate) | 0.009362512 | plantCyc |
| glycolytic process | 0.02380149 | GO:0006096 |
| Transcription_related, Transcription factor: WRKY | 0.025975397 | TF family |
| Carbon metabolism | 0.047108101 | KEGG pathway |
| embryo development ending in seed dormancy | 0.047117465 | GO:0009793 |
| methyltransferase activity | 0.048747921 | GO:0008168 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T001952 | AT1G04430 (2.00E-98) | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
| CRO_T012151 | AT1G22170 (2.00E-130) | Phosphoglycerate mutase family protein |
| CRO_T017444 | - | - |
| CRO_T018523 | AT4G23550 (1.00E-23) | ATWRKY29; WRKY29|WRKY family transcription factor |
| CRO_T019052 | AT3G53700 (0) | MEE40|maternal effect embryo arrest 40 |
| CRO_T019742 | - | - |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM001686 | UDP-glucose transmembrane transporter activity dolichyl-phosphate beta-D-mannosyltransferase activity dolichyl-phosphate beta-glucosyltransferase activity UDP-galactose transmembrane transporter activity dolichyl-phosphate-mannose-protein mannosyltransferase activity lateral root development UDP-glucose transport heme biosynthetic process photosystem II stabilization root hair cell development UDP-galactose transmembrane transport dolichol metabolic process protein O-linked mannosylation cell morphogenesis cytoskeleton organization GPI anchor biosynthetic process protein N-linked glycosylation Protein_kinases_phosphatases, PPC:4.5.4: GSK3/Shaggy Like Protein Kinase Family 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) heme biosynthesis I (aerobic) protein N-glycosylation (eukaryotic, high mannose) formation of glycosidic bonds, GlycosylTransferases: GTnc N-Glycan biosynthesis Porphyrin and chlorophyll metabolism actin binding chloroplast part | details |
| TreatCFM001785 | chloroplast photosystem II oxygen evolving complex assembly regulation of pentose-phosphate shunt 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase activity epoxide hydrolase activity cell morphogenesis single-organism transport cytoskeleton organization gluconeogenesis glycolysis I (from glucose 6-phosphate) Transcription_related, Transcription factor: bHLH photosystem II oxygen evolving complex chloroplast part extrinsic component of membrane glycolytic process single-organism cellular process protein transport membrane part thylakoid actin binding protein transporter activity Photosynthesis | details |
| TreatCFM002151 | formation of glycosidic bonds, GlycosylTransferases: GTnc dolichyl-phosphate beta-D-mannosyltransferase activity dolichyl-phosphate beta-glucosyltransferase activity dolichyl-phosphate-mannose-protein mannosyltransferase activity dolichol metabolic process singlet oxygen-mediated programmed cell death protein O-linked mannosylation hydrolase activity tetrapyrrole biosynthesis I (from glutamate) xylan biosynthesis protein N-glycosylation (eukaryotic, high mannose) Indole alkaloid biosynthesis ajmaline and sarpagine biosynthesis protein N-linked glycosylation GPI anchor biosynthetic process cellulose synthase (UDP-forming) activity thylakoid membrane N-Glycan biosynthesis unfolded protein binding cellulose biosynthetic process | details |
Expression profiles
 Show details about module gene expression profiling |