TreatCFM002131's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| glutathione-peroxide redox reactions | 0.004251233 | plantCyc |
| reactive oxygen species degradation | 0.004251233 | plantCyc |
| Arachidonic acid metabolism | 0.006820695 | KEGG pathway |
| Cell cycle - yeast | 0.006820695 | KEGG pathway |
| AMPK signaling pathway | 0.007465319 | KEGG pathway |
| glutathione peroxidase activity | 0.010339733 | GO:0004602 |
| Transcription_related, Transcription factor: NAC | 0.013051924 | TF family |
| translation elongation factor activity | 0.02579591 | GO:0003746 |
| GTPase activity | 0.048414291 | GO:0003924 |
| cellular oxidant detoxification | 0.048747921 | GO:0098869 |
| response to oxidative stress | 0.048747921 | GO:0006979 |
| translational elongation | 0.048747921 | GO:0006414 |
| cellular process | 0.048747921 | GO:0009987 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T002650 | AT4G23930 (4.00E-26) | Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family |
| CRO_T009341 | AT2G32590 (1.00E-28) | EMB2795|EMBRYO DEFECTIVE 2795 |
| CRO_T016268 | AT5G08650 (1.00E-16) | Small GTP-binding protein |
| CRO_T021242 | AT5G09330 (8.00E-35) | ANAC082|NAC domain containing protein 82; VNI1|VND-interacting 1 |
| CRO_T025445 | AT2G31570 (7.00E-09) | ATGPX2|glutathione peroxidase 2 |
| CRO_T033017 | AT2G47390 (2.00E-48) | Prolyl oligopeptidase family protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM001465 | proteolysis response to reactive oxygen species regulation of gene expression methylated histone binding AMPK signaling pathway Cell cycle - Caulobacter translational elongation Transcription_related, Transcription regulator: TRAF Ubiquitin_Proteasome_system, E3 adaptor: BTB ATP-dependent peptidase activity translation elongation factor activity | details |
| TreatCFM001729 | catalytic complex SWI/SNF complex intracellular non-membrane-bounded organelle nuclear lumen Transcription_related, Transcription factor: NAC developmental process involved in reproduction macromolecule metabolic process chromatin remodeling response to stimulus multicellular organism development methyltransferase activity serine-type endopeptidase activity | details |
| TreatCFM001887 | nickel cation binding UDP-glucose 4-epimerase activity UDP-L-arabinose biosynthesis I (from UDP-xylose) zeaxanthin, antheraxanthin and violaxanthin interconversion UDP-sugars interconversion Cell cycle - yeast galactose metabolic process nitrogen compound metabolic process Amino sugar and nucleotide sugar metabolism chloroplast thylakoid membrane cellular process | details |
| TreatCFM002122 | proteolysis serine-type endopeptidase activity gamma-glutamyl-peptidase activity folate polyglutamylation II glutamate removal from folates glutathione peroxidase activity tetrahydrofolylpolyglutamate metabolic process protein-lysine N-methyltransferase activity glutathione-peroxide redox reactions reactive oxygen species degradation Arachidonic acid metabolism Cell cycle - Caulobacter Folate biosynthesis response to reactive oxygen species Transcription_related, Transcription regulator: PHD Transcription_related, Transcription regulator: SET peptidyl-lysine monomethylation glutamine metabolic process regulation of gene expression | details |
| TreatCFM002145 | zeaxanthin, antheraxanthin and violaxanthin interconversion starch degradation II phosphorylated carbohydrate dephosphorylation alpha-amylase activity sugar-phosphatase activity hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc starch catabolic process starch binding protein tyrosine/serine/threonine phosphatase activity Transcription_related, Transcription factor: NAC chloroplast | details |
Expression profiles
 Show details about module gene expression profiling |