TreatCFM002163's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Estrogen signaling pathway | 0.00438752 | KEGG pathway |
| L-tryptophan biosynthesis | 0.010342349 | plantCyc |
| sphingolipid biosynthesis (plants) | 0.010342349 | plantCyc |
| Sphingolipid metabolism | 0.013867562 | KEGG pathway |
| phosphoribosylanthranilate isomerase activity | 0.015633677 | GO:0004640 |
| regulation of programmed cell death | 0.019302805 | GO:0043067 |
| chaperone-mediated protein folding | 0.02648495 | GO:0061077 |
| tryptophan biosynthetic process | 0.02648495 | GO:0000162 |
| cell growth | 0.02648495 | GO:0016049 |
| protein peptidyl-prolyl isomerization | 0.032698633 | GO:0000413 |
| biosynthetic process | 0.036017835 | GO:0009058 |
| FK506 binding | 0.03706421 | GO:0005528 |
| metalloendopeptidase activity | 0.040854532 | GO:0004222 |
| peptidyl-prolyl cis-trans isomerase activity | 0.040854532 | GO:0003755 |
| Biosynthesis of amino acids | 0.04533531 | KEGG pathway |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T001855 | AT5G20200 (1.00E-17) | nucleoporin-related |
| CRO_T003364 | AT2G40800 (7.00E-111) | unknown protein |
| CRO_T005543 | AT3G49740 (6.00E-168) | Tetratricopeptide repeat (TPR)-like superfamily protein |
| CRO_T008805 | AT3G03420 (1.00E-81) | Ku70-binding family protein |
| CRO_T014425 | AT2G25660 (0) | emb2410|embryo defective 2410 |
| CRO_T020532 | AT3G25230 (0) | FKBP62|FK506 BINDING PROTEIN 62; ROF1|rotamase FKBP 1 |
| CRO_T025582 | AT1G07780 (3.00E-50) | PAI1|phosphoribosylanthranilate isomerase 1; TRP6|TRANSIENT RECEPTOR POTENTIAL 6 |
| CRO_T030233 | AT3G45750 (4.00E-21) | Nucleotidyltransferase family protein |
| CRO_T033665 | AT4G36480 (0) | ATLCB1|long-chain base1; EMB2779|EMBRYO DEFECTIVE 2779; FBR11|FUMONISIN B1 RESISTANT 11 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM001200 | Protein_kinases_phosphatases, PPC:1.12.3: Leucine Rich Repeat Kinase VII arginyl-tRNA aminoacylation glycyl-tRNA aminoacylation arginine-tRNA ligase activity glycine-tRNA ligase activity Aminoacyl-tRNA biosynthesis anion transmembrane transport inorganic phosphate transmembrane transporter activity | details |
| TreatCFM002078 | Glycolysis / Gluconeogenesis mitochondrial inner membrane peptidase complex glycolysis IV (plant cytosol) diphosphate-fructose-6-phosphate 1-phosphotransferase activity mitochondrial respiratory chain complex assembly protein processing involved in protein targeting to mitochondrion 6-phosphofructokinase activity signal peptide processing glycolytic process through fructose-6-phosphate carbohydrate phosphorylation DNA metabolic process ubiquitin-dependent protein catabolic process | details |
| TreatCFM002160 | phosphoribosylanthranilate isomerase activity sucrose-phosphate synthase activity nectar secretion sucrose biosynthetic process protein targeting to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway sucrose synthase activity tryptophan biosynthetic process ESCRT II complex L-tryptophan biosynthesis reactive oxygen species degradation sucrose biosynthesis I (from photosynthesis) sucrose biosynthesis II superoxide radicals degradation Biosynthesis of amino acids Endocytosis Starch and sucrose metabolism | details |
Expression profiles
 Show details about module gene expression profiling |