|
1.Module annotation (GSEA enrichment result) | Function Annotation | FDR | Gene Ontolog | | protein folding, | 0.001570661 | GO:0006457 | | response to heat, | 0.030367076 | GO:0009408 | | unfolded protein binding, | 0.038924021 | GO:0051082 |
2.Module member annotation
3.Direct connection functional modules | Module ID | Function Annotation | Overlap condition | | CFinderM000170 | cullin-RING ubiquitin ligase complex,
ubiquitin protein ligase binding,
ubiquitin-dependent protein catabolic process,
| details | | CFinderM000214 | outer membrane,
peptidase activity,
| details | | CFinderM000217 | glycerol ether metabolic process,
RNA-dependent DNA replication,
translational initiation,
RNA metabolic process,
RNA_transport
| details | | CFinderM000229 | GT2 GlycosylTransferases
NuA4_histone_acetyltransferase_complex
histone_H2A_acetylation
protein homooligomerization,
histone_H4_acetylation
chromatin remodeling,
negative_regulation_of_transcription,_DNA-templated
RNA modification,
pseudouridine synthesis,
| details | | CFinderM000379 | arginyl-tRNA aminoacylation,
arginine-tRNA ligase activity,
tRNA processing,
tRNA (guanine-N2-)-methyltransferase activity,
tRNA aminoacylation for protein translation,
double-stranded RNA binding,
| details | | CFinderM000426 | nucleus,
| details | | CFinderM000453 | carbon fixation,
response to wounding,
Lysine_degradation
SET Transcription_Regulator(from iTAK)
| details | | CFinderM000501 | oligosaccharide metabolic process,
mannosyl-oligosaccharide glucosidase activity,
Peroxisome
N-Glycan_biosynthesis
| details | | CFinderM000540 | condensin_complex
CK1_CK1 (from iTAK)
mitotic_chromosome_condensation
| details | | CFinderM000555 | | details | | CFinderM000627 | DNA primase activity,
DNA_replication
| details | | CFinderM000734 | WASH_complex
cytoskeleton,
phagocytosis,
malate metabolic process,
cellular carbohydrate metabolic process,
malate dehydrogenase activity,
L-malate dehydrogenase activity,
| details | | CFinderM001015 | DNA primase activity,
| details | | CFinderM001142 | | details | | CFinderM001201 | glycerol ether metabolic process,
Spliceosome
cell redox homeostasis,
| details | | CFinderM001203 | SNARE_interactions_in_vesicular_transport
ubiquitin-dependent protein catabolic process,
| details | | CFinderM001242 | mitotic_spindle_assembly_checkpoint
WASH_complex
PHD Transcription_Regulator(from iTAK)
N-Glycan_biosynthesis
Various_types_of_N-glycan_biosynthesis
| details | | CFinderM001248 | DNA primase activity,
| details | | CFinderM001253 | CMGC_CLK (from iTAK)
membrane,
| details | | CFinderM001261 | thymidylate synthase activity,
dihydrofolate reductase activity,
dTMP biosynthetic process,
ribosome biogenesis,
nucleotidyltransferase activity,
| details | | CFinderM001295 | coenzyme M biosynthetic process,
Protein_processing_in_endoplasmic_reticulum
| details | | CFinderM001360 | cysteine-type peptidase activity,
galactosyltransferase activity,
protein glycosylation,
| details | | CFinderM001401 | Plant_hormone_signal_transduction
bZIP Transcription_Regulator(from PlantTFDB)
| details | | CFinderM001424 | WASH_complex
N-Glycan_biosynthesis
Various_types_of_N-glycan_biosynthesis
Peroxisome
| details | | CFinderM001581 | WASH_complex
DNA_ligation_involved_in_DNA_repair
drug_binding
DNA_ligase_activity
DNA ligase (ATP) activity,
DNA recombination,
DNA repair,
| details | | CFinderM001638 | tRNA methylation,
tRNA (guanine-N1-)-methyltransferase activity,
proton-transporting two-sector ATPase complex, proton-transporting domain,
proton-transporting V-type ATPase, V0 domain,
NAC Transcription_Regulator(from PlantTFDB)
| details | | CFinderM001799 | Various_types_of_N-glycan_biosynthesis
Base_excision_repair
N-Glycan_biosynthesis
nuclease activity,
endonuclease activity,
NAC Transcription_Regulator(from PlantTFDB)
| details |
4.Expression profilings |
