|
1.Module annotation (GSEA enrichment result) | Function Annotation | FDR | Gene Ontolog | | SNARE_interactions_in_vesicular_transport | 0.008408023 | KEGG | | ubiquitin-dependent protein catabolic process, | 0.037615402 | GO:0006511 |
2.Module member annotation
3.Direct connection functional modules | Module ID | Function Annotation | Overlap condition | | CFinderM000170 | cullin-RING ubiquitin ligase complex,
ubiquitin protein ligase binding,
ubiquitin-dependent protein catabolic process,
| details | | CFinderM000229 | GT2 GlycosylTransferases
NuA4_histone_acetyltransferase_complex
histone_H2A_acetylation
protein homooligomerization,
histone_H4_acetylation
chromatin remodeling,
negative_regulation_of_transcription,_DNA-templated
RNA modification,
pseudouridine synthesis,
| details | | CFinderM000389 | protein folding,
response to heat,
unfolded protein binding,
| details | | CFinderM000430 | unfolded protein binding,
protein folding,
| details | | CFinderM000453 | carbon fixation,
response to wounding,
Lysine_degradation
SET Transcription_Regulator(from iTAK)
| details | | CFinderM000501 | oligosaccharide metabolic process,
mannosyl-oligosaccharide glucosidase activity,
Peroxisome
N-Glycan_biosynthesis
| details | | CFinderM000540 | condensin_complex
CK1_CK1 (from iTAK)
mitotic_chromosome_condensation
| details | | CFinderM000572 | ubiquitin-dependent protein catabolic process,
| details | | CFinderM000627 | DNA primase activity,
DNA_replication
| details | | CFinderM000648 | methylmalonate-semialdehyde dehydrogenase (acylating) activity,
oxidoreductase activity,
oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor,
| details | | CFinderM000707 | CAMK_CDPK (from iTAK)
| details | | CFinderM000713 | signal peptide processing,
tRNA modification,
tRNA_guanylyltransferase_activity
F-actin capping protein complex,
actin cytoskeleton organization,
WASH_complex
| details | | CFinderM000734 | WASH_complex
cytoskeleton,
phagocytosis,
malate metabolic process,
cellular carbohydrate metabolic process,
malate dehydrogenase activity,
L-malate dehydrogenase activity,
| details | | CFinderM001009 | | details | | CFinderM001015 | DNA primase activity,
| details | | CFinderM001242 | mitotic_spindle_assembly_checkpoint
WASH_complex
PHD Transcription_Regulator(from iTAK)
N-Glycan_biosynthesis
Various_types_of_N-glycan_biosynthesis
| details | | CFinderM001248 | DNA primase activity,
| details | | CFinderM001253 | CMGC_CLK (from iTAK)
membrane,
| details | | CFinderM001261 | thymidylate synthase activity,
dihydrofolate reductase activity,
dTMP biosynthetic process,
ribosome biogenesis,
nucleotidyltransferase activity,
| details | | CFinderM001360 | cysteine-type peptidase activity,
galactosyltransferase activity,
protein glycosylation,
| details | | CFinderM001424 | WASH_complex
N-Glycan_biosynthesis
Various_types_of_N-glycan_biosynthesis
Peroxisome
| details | | CFinderM001578 | myosin complex,
protein folding,
motor activity,
| details | | CFinderM001581 | WASH_complex
DNA_ligation_involved_in_DNA_repair
drug_binding
DNA_ligase_activity
DNA ligase (ATP) activity,
DNA recombination,
DNA repair,
| details | | CFinderM001615 | Alanine,_aspartate_and_glutamate_metabolism
Nitrogen_metabolism
1,3-beta-D-glucan synthase activity,
1,3-beta-D-glucan synthase complex,
exocyst,
(1->3)-beta-D-glucan biosynthetic process,
exocytosis,
cellular amino acid metabolic process,
Arginine_and_proline_metabolism
| details | | CFinderM001799 | Various_types_of_N-glycan_biosynthesis
Base_excision_repair
N-Glycan_biosynthesis
nuclease activity,
endonuclease activity,
NAC Transcription_Regulator(from PlantTFDB)
| details |
4.Expression profilings |
