CFinderM000817's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
riboflavin synthase complex,0.00196875GO:0009349
ubiquitin protein ligase binding,0.005892974GO:0031625
cullin-RING ubiquitin ligase complex,0.008839461GO:0031461
Riboflavin_metabolism0.015625965KEGG
riboflavin biosynthetic process,0.020426292GO:0009231
cellular amino acid biosynthetic process,0.022784485GO:0008652
Nucleotide_excision_repair0.03887496KEGG

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000083G1160binding partner of acd11 1AT5G16840 (2.10E-51)
PH01000601G0550Mitochondrial substrate carrier family proteinAT2G33820 (1.30E-81)
PH01000767G0400cullin4AT5G46210 (0.00E+00)
PH01000925G0160-- (-)
PH01002641G02306,7-dimethyl-8-ribityllumazine synthase / DMRL synthase / lumazine synthase / riboflavin synthaseAT2G44050 (4.40E-39)
PH01004029G0140-- (-)
PH01005282G0030Amino acid kinase family proteinAT3G18680 (5.30E-44)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000006CAMK_CDPK (from iTAK)
transporter activity,
transport,
transmembrane transport,
polygalacturonase activity,
details
CFinderM000116nuclear chromosome,
riboflavin synthase complex,
riboflavin biosynthetic process,
phosphoglycerate kinase activity,
glycolysis,
Riboflavin_metabolism
details
CFinderM000239cullin-RING ubiquitin ligase complex,
glycogen_phosphorylase_activity
protein_binding,_bridging
actin filament binding,
phosphatidylserine biosynthetic process,
details
CFinderM000911intracellular,
Ribosome
translation,
PHD Transcription_Regulator(from iTAK)
structural constituent of ribosome,
protein import into nucleus,
details
CFinderM001168cullin-RING ubiquitin ligase complex,
SNF2 Transcription_Regulator(from iTAK)
glycogen_phosphorylase_activity
Nucleotide_excision_repair
Ubiquitin_mediated_proteolysis
details
CFinderM001228cullin-RING ubiquitin ligase complex,
SNF2 Transcription_Regulator(from iTAK)
Nucleotide_excision_repair
cell redox homeostasis,
Ubiquitin_mediated_proteolysis
ubiquitin-dependent protein catabolic process,
details
CFinderM001279cullin-RING ubiquitin ligase complex,
ubiquitin protein ligase binding,
Nucleotide_excision_repair
Ubiquitin_mediated_proteolysis
details
CFinderM001280GH17 Glycoside_Hydrolases
Arginine_and_proline_metabolism
phospholipid transport,
details
CFinderM001281phospholipid transport,
phosphatidylinositol metabolic process,
Inositol_phosphate_metabolism
Phosphatidylinositol_signaling_system
cellular protein metabolic process,
Phagosome
details
CFinderM001801GH17 Glycoside_Hydrolases
phospholipid transport,
phosphatidylinositol metabolic process,
Inositol_phosphate_metabolism
Phosphatidylinositol_signaling_system
RNA_degradation
Arginine_and_proline_metabolism
Phagosome
details

4.Expression profilings