CFinderM001279's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
cullin-RING ubiquitin ligase complex,0.00505333GO:0031461
ubiquitin protein ligase binding,0.027793317GO:0031625
Nucleotide_excision_repair0.036388081KEGG
Ubiquitin_mediated_proteolysis0.037857009KEGG

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000083G1160binding partner of acd11 1AT5G16840 (2.10E-51)
PH01000183G0150pyruvate dehydrogenase E1 betaAT1G30120 (6.00E-126)
PH01000601G0550Mitochondrial substrate carrier family proteinAT2G33820 (1.30E-81)
PH01000767G0400cullin4AT5G46210 (0.00E+00)
PH01000925G0160-- (-)
PH01002800G0100-- (-)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000006CAMK_CDPK (from iTAK)
transporter activity,
transport,
transmembrane transport,
polygalacturonase activity,
details
CFinderM000239cullin-RING ubiquitin ligase complex,
glycogen_phosphorylase_activity
protein_binding,_bridging
actin filament binding,
phosphatidylserine biosynthetic process,
details
CFinderM000817riboflavin synthase complex,
ubiquitin protein ligase binding,
cullin-RING ubiquitin ligase complex,
Riboflavin_metabolism
riboflavin biosynthetic process,
cellular amino acid biosynthetic process,
Nucleotide_excision_repair
details
CFinderM000886Spliceosome
RNA_degradation
details
CFinderM000911intracellular,
Ribosome
translation,
PHD Transcription_Regulator(from iTAK)
structural constituent of ribosome,
protein import into nucleus,
details
CFinderM001168cullin-RING ubiquitin ligase complex,
SNF2 Transcription_Regulator(from iTAK)
glycogen_phosphorylase_activity
Nucleotide_excision_repair
Ubiquitin_mediated_proteolysis
details
CFinderM001228cullin-RING ubiquitin ligase complex,
SNF2 Transcription_Regulator(from iTAK)
Nucleotide_excision_repair
cell redox homeostasis,
Ubiquitin_mediated_proteolysis
ubiquitin-dependent protein catabolic process,
details
CFinderM001280GH17 Glycoside_Hydrolases
Arginine_and_proline_metabolism
phospholipid transport,
details
CFinderM001281phospholipid transport,
phosphatidylinositol metabolic process,
Inositol_phosphate_metabolism
Phosphatidylinositol_signaling_system
cellular protein metabolic process,
Phagosome
details
CFinderM001409Whirly Transcription_Regulator(from PlantTFDB)
Glycosylphosphatidylinositol(GPI)-anchor_biosynthesis
phosphatidylinositol N-acetylglucosaminyltransferase activity,
GPI anchor biosynthetic process,
details
CFinderM001801GH17 Glycoside_Hydrolases
phospholipid transport,
phosphatidylinositol metabolic process,
Inositol_phosphate_metabolism
Phosphatidylinositol_signaling_system
RNA_degradation
Arginine_and_proline_metabolism
Phagosome
details

4.Expression profilings