|
1.Module annotation (GSEA enrichment result) | Function Annotation | FDR | Gene Ontolog | | IWS1 Transcription_Regulator(from iTAK) | 0.002997141 | GFam | | heme_a_biosynthetic_process | 0.005513275 | GO:0006784 | | threonyl-tRNA aminoacylation, | 0.008267328 | GO:0006435 | | tRNA aminoacylation, | 0.02293073 | GO:0043039 | | threonine-tRNA ligase activity, | 0.024456508 | GO:0004829 | | Aminoacyl-tRNA_biosynthesis | 0.030290945 | KEGG | | Porphyrin_and_chlorophyll_metabolism | 0.030290945 | KEGG | | ligase activity, forming aminoacyl-tRNA and related compounds, | 0.031208497 | GO:0016876 | | oxidoreductase activity, acting on the CH-CH group of donors, | 0.031208497 | GO:0016627 | | Oxidative_phosphorylation | 0.043912148 | KEGG | | nucleotide binding, | 0.044788775 | GO:0000166 | | tRNA aminoacylation for protein translation, | 0.047303717 | GO:0006418 |
2.Module member annotation | Gene ID | Annotation | Arabidopsis ortholog (Blast e-value) | | PH01000435G0100 | cytochrome c oxidase 15 | AT5G56090 (3.00E-152) | | PH01001201G0390 | polypyrimidine tract-binding protein 3 | AT1G43190 (4.00E-109) | | PH01001248G0150 | Threonyl-tRNA synthetase | AT5G26830 (0.00E+00) | | PH01001307G0060 | - | AT2G14910 (2.00E-46) | | PH01002277G0170 | Transcription elongation factor (TFIIS) family protein | AT5G05140 (8.90E-50) | | PH01003431G0170 | Protein of unknown function (DUF630 and DUF632) | AT4G35240 (2.30E-69) |
3.Direct connection functional modules | Module ID | Function Annotation | Overlap condition | | CFinderM000538 | GT61 GlycosylTransferases
RLK-Pelle_PERK-1 (from iTAK)
GT47 GlycosylTransferases
Aminoacyl-tRNA_biosynthesis
threonyl-tRNA aminoacylation,
response to oxidative stress,
histidine_catabolic_process_to_glutamate_and_formamide
| details | | CFinderM000694 | IWS1 Transcription_Regulator(from iTAK)
| details | | CFinderM000797 | threonyl-tRNA aminoacylation,
tRNA aminoacylation,
microtubule cytoskeleton organization,
cytokinesis
Aminoacyl-tRNA_biosynthesis
Ribosome_biogenesis_in_eukaryotes
threonine-tRNA ligase activity,
cellular amino acid metabolic process,
tRNA aminoacylation for protein translation,
ligase activity, forming aminoacyl-tRNA and related compounds,
microtubule binding,
| details | | CFinderM000900 | phosphopyruvate hydratase complex,
glycolysis,
phosphopyruvate hydratase activity,
Alanine,_aspartate_and_glutamate_metabolism
TKL-Pl-6 (from iTAK)
magnesium ion binding,
argininosuccinate synthase activity,
6-phosphofructokinase complex,
arginine biosynthetic process,
| details | | CFinderM001118 | Aminoacyl-tRNA_biosynthesis
threonyl-tRNA aminoacylation,
HSF Transcription_Regulator(from PlantTFDB)
threonine-tRNA ligase activity,
tRNA aminoacylation,
C2H2 Transcription_Regulator(from PlantTFDB)
ligase activity, forming aminoacyl-tRNA and related compounds,
tRNA aminoacylation for protein translation,
cellular protein metabolic process,
| details | | CFinderM001215 | Valine,_leucine_and_isoleucine_biosynthesis
heme_a_biosynthetic_process
dihydroxy-acid dehydratase activity,
branched chain family amino acid biosynthetic process,
Pantothenate_and_CoA_biosynthesis
oxidoreductase activity, acting on the CH-CH group of donors,
Porphyrin_and_chlorophyll_metabolism
ubiquitin ligase complex,
Ribosome_biogenesis_in_eukaryotes
| details | | CFinderM001282 | protein methylation,
intracellular,
methyltransferase activity,
nucleotide binding,
nucleic acid binding,
IWS1 Transcription_Regulator(from iTAK)
ribosome biogenesis,
transport,
| details | | CFinderM001397 | GT4 GlycosylTransferases
| details | | CFinderM001494 | GRAS Transcription_Regulator(from PlantTFDB)
protein catabolic process,
| details | | CFinderM001535 | TAZ Transcription_Regulator(from iTAK)
transcription cofactor activity,
histone acetyltransferase activity,
Oxidative_phosphorylation
peptidyl-prolyl cis-trans isomerase activity,
| details | | CFinderM001684 | heme_a_biosynthetic_process
peroxisomal membrane,
mitochondrial outer membrane,
protein_import_into_peroxisome_matrix
negative_regulation_of_transcription,_DNA-templated
transcription_corepressor_activity
| details | | CFinderM001744 | Ribosome_biogenesis_in_eukaryotes
Aminoacyl-tRNA_biosynthesis
threonyl-tRNA aminoacylation,
threonine-tRNA ligase activity,
tRNA aminoacylation,
tRNA aminoacylation for protein translation,
cellular protein metabolic process,
RNA processing,
ligase activity, forming aminoacyl-tRNA and related compounds,
| details |
4.Expression profilings |
