|
1.Module annotation (GSEA enrichment result) | Function Annotation | FDR | Gene Ontolog | | heme_a_biosynthetic_process | 0.007350344 | GO:0006784 | | peroxisomal membrane, | 0.010298328 | GO:0005778 | | mitochondrial outer membrane, | 0.010298328 | GO:0005741 | | protein_import_into_peroxisome_matrix | 0.014691043 | GO:0016558 | | negative_regulation_of_transcription,_DNA-templated | 0.020791832 | GO:0045892 | | transcription_corepressor_activity | 0.031746619 | GO:0003714 |
2.Module member annotation
3.Direct connection functional modules | Module ID | Function Annotation | Overlap condition | | CFinderM000433 | Ribosome_biogenesis_in_eukaryotes
ATP-dependent helicase activity,
threonine-tRNA ligase activity,
helicase activity,
| details | | CFinderM000797 | threonyl-tRNA aminoacylation,
tRNA aminoacylation,
microtubule cytoskeleton organization,
cytokinesis
Aminoacyl-tRNA_biosynthesis
Ribosome_biogenesis_in_eukaryotes
threonine-tRNA ligase activity,
cellular amino acid metabolic process,
tRNA aminoacylation for protein translation,
ligase activity, forming aminoacyl-tRNA and related compounds,
microtubule binding,
| details | | CFinderM001004 | IWS1 Transcription_Regulator(from iTAK)
heme_a_biosynthetic_process
threonyl-tRNA aminoacylation,
tRNA aminoacylation,
threonine-tRNA ligase activity,
Aminoacyl-tRNA_biosynthesis
Porphyrin_and_chlorophyll_metabolism
ligase activity, forming aminoacyl-tRNA and related compounds,
oxidoreductase activity, acting on the CH-CH group of donors,
Oxidative_phosphorylation
nucleotide binding,
tRNA aminoacylation for protein translation,
| details | | CFinderM001215 | Valine,_leucine_and_isoleucine_biosynthesis
heme_a_biosynthetic_process
dihydroxy-acid dehydratase activity,
branched chain family amino acid biosynthetic process,
Pantothenate_and_CoA_biosynthesis
oxidoreductase activity, acting on the CH-CH group of donors,
Porphyrin_and_chlorophyll_metabolism
ubiquitin ligase complex,
Ribosome_biogenesis_in_eukaryotes
| details | | CFinderM001471 | regulation of translational initiation,
eukaryotic translation initiation factor 3 complex,
WRKY Transcription_Regulator(from PlantTFDB)
| details | | CFinderM001530 | GT66 GlycosylTransferases
oligosaccharyl transferase activity,
regulation of Rab GTPase activity,
protein glycosylation,
Rab GTPase activator activity,
C2H2 Transcription_Regulator(from PlantTFDB)
| details | | CFinderM001622 | Aminoacyl-tRNA_biosynthesis
tRNA aminoacylation for protein translation,
aminoacyl-tRNA ligase activity,
cytoplasm,
threonyl-tRNA aminoacylation,
ATP binding,
tyrosine-tRNA ligase activity,
threonine-tRNA ligase activity,
tRNA aminoacylation,
protein catabolic process,
ATP-dependent peptidase activity,
ligase activity, forming aminoacyl-tRNA and related compounds,
| details | | CFinderM001647 | phenylalanyl-tRNA aminoacylation,
phenylalanine-tRNA ligase activity,
tRNA binding,
tRNA aminoacylation,
Aminoacyl-tRNA_biosynthesis
aminoacyl-tRNA ligase activity,
fumarate metabolic process,
nucleotide binding,
magnesium ion binding,
tricarboxylic acid cycle enzyme complex,
fumarate hydratase activity,
cytoplasm,
mitochondrial outer membrane,
RNA binding,
tricarboxylic acid cycle,
Carbon_fixation_pathways_in_prokaryotes
Citrate_cycle_(TCA_cycle)
lyase activity,
| details | | CFinderM001696 | phenylalanyl-tRNA aminoacylation,
microtubule,
mitochondrial outer membrane,
protein complex,
Fatty_acid_metabolism
Peroxisome
Aminoacyl-tRNA_biosynthesis
phenylalanine-tRNA ligase activity,
tRNA aminoacylation,
protein polymerization,
microtubule-based process,
tRNA binding,
| details | | CFinderM001698 | Steroid_biosynthesis
endodeoxyribonuclease activity, producing 5'-phosphomonoesters,
sterol_24-C-methyltransferase_activity
single-stranded DNA binding,
protein tyrosine phosphatase activity,
protein tyrosine/serine/threonine phosphatase activity,
WRKY Transcription_Regulator(from PlantTFDB)
dephosphorylation,
steroid biosynthetic process,
| details | | CFinderM001744 | Ribosome_biogenesis_in_eukaryotes
Aminoacyl-tRNA_biosynthesis
threonyl-tRNA aminoacylation,
threonine-tRNA ligase activity,
tRNA aminoacylation,
tRNA aminoacylation for protein translation,
cellular protein metabolic process,
RNA processing,
ligase activity, forming aminoacyl-tRNA and related compounds,
| details | | CFinderM001889 | GT66 GlycosylTransferases
mitochondrial proton-transporting ATP synthase complex, catalytic core F(1),
oligosaccharyl transferase activity,
ATP_catabolic_process
ATP biosynthetic process,
ATP metabolic process,
proton transport,
Protein_processing_in_endoplasmic_reticulum
protein glycosylation,
| details | | CFinderM001895 | phenylalanyl-tRNA aminoacylation,
mitochondrial outer membrane,
Aminoacyl-tRNA_biosynthesis
tRNA aminoacylation,
phenylalanine-tRNA ligase activity,
tRNA binding,
| details |
4.Expression profilings |
