CFinderM001039's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
acetyl-CoA carboxylase activity,0.016704415GO:0003989
biotin_carboxylase_activity0.016704415GO:0004075
Fatty_acid_biosynthesis0.020566741KEGG
Propanoate_metabolism0.020566741KEGG
Pyruvate_metabolism0.027676309KEGG
cytokinesis0.027779891GO:0000910
microtubule cytoskeleton organization,0.027779891GO:0000226
ligase activity,0.031785628GO:0016874
microtubule binding,0.033354053GO:0008017

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000353G04502-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily proteinAT1G68080 (2.70E-56)
PH01000677G0200acetyl-CoA carboxylase 1AT1G36160 (0.00E+00)
PH01001251G0530-AT1G10790 (9.90E-35)
PH01002674G0050Microtubule associated protein (MAP65/ASE1) family proteinAT2G01910 (3.00E-159)
PH01002740G0130-- (-)
PH01003243G0030HIT-type Zinc finger family proteinAT5G37055 (1.40E-49)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000144protein binding,
acid-amino acid ligase activity,
details
CFinderM000243Alanine,_aspartate_and_glutamate_metabolism
adenylosuccinate synthase activity,
purine nucleotide biosynthetic process,
cytokinesis
microtubule cytoskeleton organization,
RNA-dependent DNA replication,
Purine_metabolism
details
CFinderM000408Group-Pl-3 (from iTAK)
histidine_catabolic_process_to_glutamate_and_formamide
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides,
details
CFinderM000691ornithine carbamoyltransferase activity,
phosphoribosyl-AMP cyclohydrolase activity,
ornithine_metabolic_process
carboxyl- or carbamoyltransferase activity,
histone deacetylase activity,
histone deacetylation,
Histidine_metabolism
histidine biosynthetic process,
Arginine_and_proline_metabolism
cellular amino acid metabolic process,
cellular protein metabolic process,
amino acid binding,
details
CFinderM000717tRNA processing,
details
CFinderM001109RLK-Pelle_LRR-VI-2 (from iTAK)
regulation of Rab GTPase activity,
Spliceosome
details
CFinderM001131details
CFinderM001516Ribosome_biogenesis_in_eukaryotes
MYB_related Transcription_Regulator(from PlantTFDB)
MYB-related Transcription_Regulator(from iTAK)
details
CFinderM001517N-acetyl-gamma-glutamyl-phosphate reductase activity,
cellular amino acid biosynthetic process,
cellular amino acid metabolic process,
details
CFinderM001718phosphoribosyl-AMP cyclohydrolase activity,
histidine biosynthetic process,
RNA modification,
pseudouridine synthesis,
nuclear pore,
details
CFinderM001773Group-Pl-3 (from iTAK)
phosphoribosylformylglycinamidine cyclo-ligase activity,
'de novo' IMP biosynthetic process,
intracellular,
details
CFinderM001805Golgi vesicle transport,
vesicle-mediated transport,
Spliceosome
details
CFinderM001848Valine,_leucine_and_isoleucine_biosynthesis
C5-Branched_dibasic_acid_metabolism
SBP Transcription_Regulator(from PlantTFDB)
Pantothenate_and_CoA_biosynthesis
Butanoate_metabolism
branched chain family amino acid biosynthetic process,
acetolactate synthase activity,
details
CFinderM001882Valine,_leucine_and_isoleucine_biosynthesis
C5-Branched_dibasic_acid_metabolism
branched chain family amino acid biosynthetic process,
SBP Transcription_Regulator(from PlantTFDB)
Butanoate_metabolism
Pantothenate_and_CoA_biosynthesis
acetolactate synthase activity,
details

4.Expression profilings