CFinderM001210's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
Peroxisome0.016484276KEGG
protein refolding,0.026535114GO:0042026
Nucleotide_excision_repair0.036388081KEGG
Ubiquitin_mediated_proteolysis0.037857009KEGG
cellular protein metabolic process,0.045895371GO:0044267

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000316G0140snRNA activating complex family proteinAT1G28560 (1.40E-85)
PH01000391G0210damaged DNA binding protein 1AAT4G05420 (0.00E+00)
PH01000535G0130chaperonin-60alphaAT2G28000 (0)
PH01000980G0210cyclin-dependent kinase D1;3AT1G18040 (5.40E-42)
PH01001547G0210sucrose phosphate synthase 1FAT5G20280 (1.00E-143)
PH01003187G0090Putative endonuclease or glycosyl hydrolaseAT3G62200 (9.00E-104)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000809glucose-6-phosphate isomerase activity,
transcription factor TFIID complex,
gluconeogenesis,
transcription initiation, DNA-dependent,
glycolysis,
Nucleotide_excision_repair
Ubiquitin_mediated_proteolysis
details
CFinderM001160TLK (from iTAK)
cell_cortex

details
CFinderM001607mediator complex,
nucleus,
regulation of transcription from RNA polymerase II promoter,
Nucleotide_excision_repair
Ubiquitin_mediated_proteolysis
RNA_polymerase_II_transcription_cofactor_activity
details
CFinderM001640TLK (from iTAK)
transcription factor TFIID complex,
SNF2 Transcription_Regulator(from iTAK)
transcription initiation, DNA-dependent,
Nucleotide_excision_repair
Ubiquitin_mediated_proteolysis
details

4.Expression profilings