Function module details

CFinderM001607's details annotation

Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein

This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function Annotation	FDR	Gene Ontolog
mediator complex,	0.011796633	GO:0016592
nucleus,	0.011930847	GO:0005634
regulation of transcription from RNA polymerase II promoter,	0.01963956	GO:0006357
Nucleotide_excision_repair	0.036388081	KEGG
Ubiquitin_mediated_proteolysis	0.037857009	KEGG
RNA_polymerase_II_transcription_cofactor_activity	0.044892744	GO:0001104

2.Module member annotation

Gene ID	Annotation	Arabidopsis ortholog (Blast e-value)
PH01000361G0140	IAP-like protein 1	AT1G17210 (0.00E+00)
PH01000391G0210	damaged DNA binding protein 1A	AT4G05420 (0.00E+00)
PH01000523G0130	TRAF-like superfamily protein	AT1G04300 (2.00E-133)
PH01000642G0360	ARM repeat superfamily protein	AT5G15680 (0.00E+00)
PH01000676G0170	RNA polymerase II transcription mediators	AT3G04740 (0.00E+00)
PH01001547G0210	sucrose phosphate synthase 1F	AT5G20280 (1.00E-143)

3.Direct connection functional modules

Module ID	Function Annotation	Overlap condition
CFinderM000809	glucose-6-phosphate isomerase activity, transcription factor TFIID complex, gluconeogenesis, transcription initiation, DNA-dependent, glycolysis, Nucleotide_excision_repair Ubiquitin_mediated_proteolysis	details
CFinderM001160	TLK (from iTAK) cell_cortex	details
CFinderM001210	Peroxisome protein refolding, Nucleotide_excision_repair Ubiquitin_mediated_proteolysis cellular protein metabolic process,	details
CFinderM001640	TLK (from iTAK) transcription factor TFIID complex, SNF2 Transcription_Regulator(from iTAK) transcription initiation, DNA-dependent, Nucleotide_excision_repair Ubiquitin_mediated_proteolysis	details

4.Expression profilings