CFinderM001244's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
iron-sulfur cluster assembly,0.004306034GO:0016226

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000010G3180-AT2G36895 (1.50E-70)
PH01000339G0160-AT5G09580 (4.50E-85)
PH01000445G0230-AT1G48300 (1.30E-21)
PH01000592G0530RING/U-box superfamily proteinAT4G32600 (1.00E-108)
PH01001037G0590Protein of unknown function (DUF399 and DUF3411)AT3G56140 (0.00E+00)
PH01002083G0220ATP binding cassette protein 1AT4G04770 (0.00E+00)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000084cell wall macromolecule catabolic process,
chitin catabolic process,
WRKY Transcription_Regulator(from PlantTFDB)
defense response to fungus,
ammonium_transport
ammonium_transmembrane_transport
defense response to bacterium,
metabolic process,
chitinase activity,
details
CFinderM000188ubiquitin-dependent protein catabolic process,
details
CFinderM000395NAC Transcription_Regulator(from PlantTFDB)
regulation of transcription, DNA-dependent,
details
CFinderM000396Steroid_hormone_biosynthesis
Drug_metabolism_-_other_enzymes
Pentose_and_glucuronate_interconversions
Retinol_metabolism
Drug_metabolism_-_cytochrome_P450
Ascorbate_and_aldarate_metabolism
Metabolism_of_xenobiotics_by_cytochrome_P450
Porphyrin_and_chlorophyll_metabolism
details
CFinderM000397clathrin_coat_assembly
clathrin_coat
clathrin_binding
1-phosphatidylinositol_binding
Spliceosome
phospholipid binding,
details
CFinderM000632Zeatin_biosynthesis
NAC Transcription_Regulator(from PlantTFDB)
WRKY Transcription_Regulator(from PlantTFDB)
details
CFinderM000652electron carrier activity,
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen,
iron ion binding,
heme binding,
ubiquitin ligase complex,
protein ubiquitination,
oxidation-reduction process,
details
CFinderM001226protein complex,
microtubule,
translational initiation,
microtubule-based process,
protein polymerization,
GTP_catabolic_process
Phagosome
RNA_transport
details
CFinderM001342details
CFinderM001538oligopeptide transport,
transporter activity,
details

4.Expression profilings