|
1.Module annotation (GSEA enrichment result) | Function Annotation | FDR | Gene Ontolog | | RLK-Pelle_LRR-II (from iTAK) | 0.021627161 | GFam | | bZIP Transcription_Regulator(from PlantTFDB) | 0.036824004 | GFam | | endoplasmic reticulum, | 0.039171861 | GO:0005783 | | nucleotide kinase activity, | 0.044168257 | GO:0019201 | | phosphotransferase activity, phosphate group as acceptor, | 0.044168257 | GO:0016776 | | nucleobase-containing compound kinase activity, | 0.044168257 | GO:0019205 | | nucleotide_phosphorylation | 0.044819417 | GO:0046939 |
2.Module member annotation | Gene ID | Annotation | Arabidopsis ortholog (Blast e-value) | | PH01000049G0150 | bZIP transcription factor family protein | AT5G06950 (2.00E-109) | | PH01000236G0850 | adenosine kinase | AT2G37250 (1.00E-101) | | PH01000555G0170 | cation-chloride co-transporter 1 | AT1G30450 (2.00E-128) | | PH01000685G0720 | thioredoxin family protein | AT2G47470 (1.00E-147) | | PH01001726G0190 | AAA-type ATPase family protein | AT4G04910 (1.60E-35) | | PH01002515G0010 | leucine-rich repeat transmembrane protein kinase family protein | AT5G10290 (0.00E+00) |
3.Direct connection functional modules | Module ID | Function Annotation | Overlap condition | | CFinderM001472 | Protein_processing_in_endoplasmic_reticulum
COPI vesicle coat,
membrane coat,
endoplasmic reticulum,
RLK-Pelle_LysM (from iTAK)
Golgi-associated vesicle,
structural molecule activity,
cell redox homeostasis,
vesicle-mediated transport,
intracellular protein transport,
retrograde vesicle-mediated transport, Golgi to ER,
nucleotide_phosphorylation
Various_types_of_N-glycan_biosynthesis
N-Glycan_biosynthesis
| details |
4.Expression profilings |
